RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 EDIL3O43854 480 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 MMP1P03956 469 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 CYP3A7P24462 503 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 MRPS5P82675 430 aaKnown RBP16.31■□□□□ 0.2
CLDND1-206ENST00000502299 ITGB3BPQ13352 177 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-206ENST00000502299 INF2Q27J81 1249 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 KRT40Q6A162 431 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
CLDND1-206ENST00000502299 MTIF3Q9H2K0 278 aaKnown RBP16.31■□□□□ 0.2
CLDND1-206ENST00000502299 SMARCAD1Q9H4L7 1026 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 TRMT13Q9NUP7 481 aaKnown RBP16.31■□□□□ 0.2
CLDND1-206ENST00000502299 GTF2IRD1Q9UHL9 959 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 NOD1Q9Y239 953 aa16.31■□□□□ 0.2
CLDND1-206ENST00000502299 SCN10AQ9Y5Y9 1956 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 DHX15O43143 795 aaKnown RBP16.3■□□□□ 0.2
CLDND1-206ENST00000502299 SAFBQ15424 915 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLDND1-206ENST00000502299 PTGISQ16647 500 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 Q4G0T1 1027 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 NEK8Q86SG6 692 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 PPP1R13LQ8WUF5 828 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 C8orf76Q96K31 380 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 TELO2Q9Y4R8 837 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 SLC4A7Q9Y6M7 1214 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 MYO9BQ13459 2157 aa16.3■□□□□ 0.2
CLDND1-206ENST00000502299 BTBD18B2RXH4 712 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 ATG7O95352 703 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 CD2BP2O95400 341 aaKnown RBP16.29■□□□□ 0.2
CLDND1-206ENST00000502299 CYP2C9P11712 490 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 ACTR2P61160 394 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 GDF6Q6KF10 455 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-206ENST00000502299 DIS3L2Q8IYB7 885 aaKnown RBP16.29■□□□□ 0.2
CLDND1-206ENST00000502299 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
CLDND1-206ENST00000502299 GLG1Q92896 1179 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 TNPO1Q92973 898 aaKnown RBP16.29■□□□□ 0.2
CLDND1-206ENST00000502299 LENG9Q96B70 501 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-206ENST00000502299 AZI2Q9H6S1 392 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 ERAP1Q9NZ08 941 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 TCEAL9Q9UHQ7 104 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 KIF3AQ9Y496 699 aa16.29■□□□□ 0.2
CLDND1-206ENST00000502299 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 DDX39AO00148 427 aaKnown RBP16.28■□□□□ 0.2
CLDND1-206ENST00000502299 MSH4O15457 936 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 LGR5O75473 907 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 TDP2O95551 362 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 GNAT1P11488 350 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 GCFC2P16383 781 aaKnown RBP16.28■□□□□ 0.2
CLDND1-206ENST00000502299 STAT5BP51692 787 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 FOSBP53539 338 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 NR5A1Q13285 461 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 LETM2Q2VYF4 491 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 PPP2R2DQ66LE6 453 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 PPP4R3AQ6IN85 833 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 ZNF746Q6NUN9 644 aaPredicted RBP16.28■□□□□ 0.2
CLDND1-206ENST00000502299 PLPPR4Q7Z2D5 763 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 MBOAT7Q96N66 472 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 RIT2Q99578 217 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 DDX25Q9UHL0 483 aaKnown RBP16.28■□□□□ 0.2
CLDND1-206ENST00000502299 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
CLDND1-206ENST00000502299 EMSYQ7Z589 1322 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 SMIM10L2AP0DMW4 78 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 SMIM10L2BP0DMW5 78 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 ATP2A2P16615 1042 aaKnown RBP16.27■□□□□ 0.2
CLDND1-206ENST00000502299 KRT76Q01546 638 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 BFSP2Q13515 415 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 MIS18BP1Q6P0N0 1132 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 TRIM50Q86XT4 487 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 SMAP1Q8IYB5 467 aaPredicted RBP16.27■□□□□ 0.2
CLDND1-206ENST00000502299 CCDC155Q8N6L0 562 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 RETREG2Q8NC44 543 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 SLC5A5Q92911 643 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 NECAB3Q96P71 396 aaPredicted RBP16.27■□□□□ 0.2
CLDND1-206ENST00000502299 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
CLDND1-206ENST00000502299 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.27■□□□□ 0.2
CLDND1-206ENST00000502299 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.19
CLDND1-206ENST00000502299 NRCAMQ92823 1304 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 IGKV6D-21A0A0A0MT36 114 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 RFXAPO00287 272 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
CLDND1-206ENST00000502299 GAS7O60861 476 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 CCNE2O96020 404 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 BMP1P13497 986 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 SLC26A2P50443 739 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 TFF2Q03403 129 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 PTK7Q13308 1070 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 EARS2Q5JPH6 523 aaKnown RBP16.26■□□□□ 0.19
CLDND1-206ENST00000502299 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 DEFB128Q7Z7B8 93 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 MICALL1Q8N3F8 863 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 PCYT2Q99447 389 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms