RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 CCDC60Q8IWA6 550 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-228ENST00000498814 PPP1R13LQ8WUF5 828 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 RNPEPQ9H4A4 650 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 ZNF302Q9NR11 478 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.54■□□□□ 0.4
CPNE1-228ENST00000498814 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 PCDHA12Q9UN75 941 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 PCDHB6Q9Y5E3 794 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 MAFBQ9Y5Q3 323 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-228ENST00000498814 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 B4GALT4O60513 344 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 OR52Z1P0C646 297 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 SMIM10L2AP0DMW4 78 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 SMIM10L2BP0DMW5 78 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 HOXC8P31273 242 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 TXKP42681 527 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-228ENST00000498814 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 TRPV6Q9H1D0 765 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 TTC12Q9H892 705 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-228ENST00000498814 PDLIM7Q9NR12 457 aa17.53■□□□□ 0.4
CPNE1-228ENST00000498814 TRMT13Q9NUP7 481 aaKnown RBP17.53■□□□□ 0.4
CPNE1-228ENST00000498814 IGSF9BQ9UPX0 1349 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 EML1O00423 815 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 LAD1O00515 517 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 KIAA0355O15063 1070 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 MARK3P27448 753 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 PTGDRQ13258 359 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 PLCB4Q15147 1175 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 PDXDC2PQ6P474 469 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 TNPO1Q92973 898 aaKnown RBP17.52■□□□□ 0.4
CPNE1-228ENST00000498814 ZSCAN16Q9H4T2 348 aaPredicted RBP17.52■□□□□ 0.4
CPNE1-228ENST00000498814 TMEM39AQ9NV64 488 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 GABBR1Q9UBS5 961 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 TBX21Q9UL17 535 aa17.52■□□□□ 0.4
CPNE1-228ENST00000498814 NRCAMQ92823 1304 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 C17orf102A2RUQ5 167 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 GNAT1P11488 350 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 EPHA7Q15375 998 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 PTGISQ16647 500 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 PRKAG2Q9UGJ0 569 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 LTBP2Q14767 1821 aa17.51■□□□□ 0.39
CPNE1-228ENST00000498814 POTEB3A0JP26 581 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 TRIM43BA6NCK2 446 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 H0YGN5 161 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 ATP4AP20648 1035 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 PRPHP41219 470 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 ADAM17P78536 824 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 HIC1Q14526 733 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 NCAPH2Q6IBW4 605 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 POTEBQ6S5H4 581 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 ATP8B4Q8TF62 1192 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 ATP6V0A1Q93050 837 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 TRIM43Q96BQ3 446 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-228ENST00000498814 CTAGE1Q96RT6 745 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 PRDM5Q9NQX1 630 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-228ENST00000498814 SETD4Q9NVD3 440 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-228ENST00000498814 TRPC6Q9Y210 931 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 NOD1Q9Y239 953 aa17.5■□□□□ 0.39
CPNE1-228ENST00000498814 RRN3P2A6NIE6 340 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 ZNF862O60290 1169 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 HBP1O60381 514 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 ZSCAN22P10073 491 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-228ENST00000498814 INSRRP14616 1297 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 SYN1P17600 705 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-228ENST00000498814 ATP2C1P98194 919 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-228ENST00000498814 PPFIA1Q13136 1202 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 UGCGQ16739 394 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 LMBR1Q8WVP7 490 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-228ENST00000498814 FAM167AQ96KS9 214 aa17.49■□□□□ 0.39
CPNE1-228ENST00000498814 DKC1O60832 514 aaKnown RBP eCLIP17.48■□□□□ 0.39
CPNE1-228ENST00000498814 BMP15O95972 392 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
CPNE1-228ENST00000498814 CYP2C9P11712 490 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 TECP42680 631 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 QARSP47897 775 aaKnown RBP17.48■□□□□ 0.39
CPNE1-228ENST00000498814 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
CPNE1-228ENST00000498814 PSMC5P62195 406 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 PTK7Q13308 1070 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 GRIK4Q16099 956 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 TMEM266Q2M3C6 531 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 ZNF484Q5JVG2 852 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 SERINC5Q86VE9 423 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 CKAP2LQ8IYA6 745 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 NOC4LQ9BVI4 516 aaKnown RBP17.48■□□□□ 0.39
CPNE1-228ENST00000498814 COL1A2P08123 1366 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 EVPLQ92817 2033 aa17.48■□□□□ 0.39
CPNE1-228ENST00000498814 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-228ENST00000498814 POTEMA6NI47 508 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 TREHO43280 583 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 TIMP1P01033 207 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 OATP04181 439 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 RAG1P15918 1043 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 PRKCEQ02156 737 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 PDIA5Q14554 519 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 MARCH8Q5T0T0 291 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms