RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
CCDC171-209ENST00000498725 TLR9Q9NR96 1032 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 FNDC1Q4ZHG4 1894 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-209ENST00000498725 DGKIO75912 1065 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 EYA4O95677 639 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 GLP2RO95838 553 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 PDGFBP01127 241 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-209ENST00000498725 CD52P31358 61 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
CCDC171-209ENST00000498725 ADAM17P78536 824 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 TMEM62Q0P6H9 643 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 NEDD9Q14511 834 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 FBXO47Q5MNV8 452 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 SPOUT1Q5T280 376 aaKnown RBP10.55□□□□□ -0.72
CCDC171-209ENST00000498725 EFHBQ8N7U6 833 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 SMRP1Q8NCR6 262 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 LINC01599Q8WXQ3 324 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 PRRX2Q99811 253 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 PLVAPQ9BX97 442 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 FAM49AQ9H0Q0 323 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-209ENST00000498725 TLE6Q9H808 572 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 EHMT1Q9H9B1 1298 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 PKD2L1Q9P0L9 805 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 MAD2L2Q9UI95 211 aa10.55□□□□□ -0.72
CCDC171-209ENST00000498725 USP34Q70CQ2 3546 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 SPATA31C2B4DYI2 1134 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 SDSP20132 328 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 AVPR2P30518 371 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 TCF7P36402 384 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-209ENST00000498725 SIGLEC14Q08ET2 396 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 MGAT3Q09327 533 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 PPFIA1Q13136 1202 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 CWC27Q6UX04 472 aaKnown RBP10.54□□□□□ -0.72
CCDC171-209ENST00000498725 METTL7BQ6UX53 244 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 RSPH3Q86UC2 560 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 P2RX5Q93086 422 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 PHF7Q9BWX1 381 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-209ENST00000498725 AGO3Q9H9G7 860 aaKnown RBP10.54□□□□□ -0.72
CCDC171-209ENST00000498725 MAP3K20Q9NYL2 800 aaKnown RBP10.54□□□□□ -0.72
CCDC171-209ENST00000498725 TUBE1Q9UJT0 475 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 LRFN2Q9ULH4 789 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 NRCAMQ92823 1304 aa10.54□□□□□ -0.72
CCDC171-209ENST00000498725 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 FIBPO43427 364 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 MRPS6P82932 125 aaKnown RBP10.53□□□□□ -0.72
CCDC171-209ENST00000498725 GHRHRQ02643 423 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 COASYQ13057 564 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 GRIK4Q16099 956 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 PKN1Q16512 942 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
CCDC171-209ENST00000498725 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 LLGL2Q6P1M3 1020 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 TSHZ1Q6ZSZ6 1077 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 CYB5R4Q7L1T6 521 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 RTN4RL1Q86UN2 441 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-209ENST00000498725 CMTR2Q8IYT2 770 aaKnown RBP10.53□□□□□ -0.72
CCDC171-209ENST00000498725 GLG1Q92896 1179 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 INPP4AQ96PE3 977 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-209ENST00000498725 KRT23Q9C075 422 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 LNPKQ9C0E8 428 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
CCDC171-209ENST00000498725 ICAM3P32942 547 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 CBX2Q14781 532 aaPredicted RBP10.52□□□□□ -0.73
CCDC171-209ENST00000498725 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 TAF2Q6P1X5 1199 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 ASCL5Q7RTU5 278 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 NPAS4Q8IUM7 802 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 VN1R2Q8NFZ6 395 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 SMARCC2Q8TAQ2 1214 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 TRAPPC12Q8WVT3 735 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 ASIC4Q96FT7 647 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 HCSTQ9UBK5 93 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 CDH22Q9UJ99 828 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 PADI3Q9ULW8 664 aa10.52□□□□□ -0.73
CCDC171-209ENST00000498725 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-209ENST00000498725 M0QZ92 97 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 ATP9AO75110 1047 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 STAG3L1P0CL83 205 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 SCG2P13521 617 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 TECP42680 631 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 ERVFC1P60507 584 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 APOBRQ0VD83 1088 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 PAK2Q13177 524 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 SEC23AQ15436 765 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 PTPN21Q16825 1174 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 NAALADL2Q58DX5 795 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 MARCH8Q5T0T0 291 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 PLPP4Q5VZY2 271 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 NLRX1Q86UT6 975 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 NEK1Q96PY6 1258 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 TMEM260Q9NX78 707 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 PCDHB12Q9Y5F1 795 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms