RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 V9GY48 417 aaPredicted RBP12.62□□□□□ -0.39
LSAMP-206ENST00000498645 SMCO2A6NFE2 343 aa12.61□□□□□ -0.39
LSAMP-206ENST00000498645 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
LSAMP-206ENST00000498645 STXBP3O00186 592 aa12.61□□□□□ -0.39
LSAMP-206ENST00000498645 CPA1P15085 419 aa12.61□□□□□ -0.39
LSAMP-206ENST00000498645 EXOSC10Q01780 885 aaKnown RBP12.61□□□□□ -0.39
LSAMP-206ENST00000498645 LPIN1Q14693 890 aa12.61□□□□□ -0.39
LSAMP-206ENST00000498645 EPC2Q52LR7 807 aa12.61□□□□□ -0.39
LSAMP-206ENST00000498645 PPP1R18Q6NYC8 613 aa12.61□□□□□ -0.39
LSAMP-206ENST00000498645 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
LSAMP-206ENST00000498645 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
LSAMP-206ENST00000498645 MAFGO15525 162 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 CSPG5O95196 566 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 ARP10275 920 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 INSRRP14616 1297 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 COL9A1P20849 921 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 CDC27P30260 824 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 ZNF76P36508 570 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 ACTR2P61160 394 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 MRPS6P82932 125 aaKnown RBP12.6□□□□□ -0.39
LSAMP-206ENST00000498645 MGAT3Q09327 533 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 TMEM62Q0P6H9 643 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 FUT2Q10981 343 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 GPM6BQ13491 265 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 KRT32Q14532 448 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 PTPROQ16827 1216 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 MARCH8Q5T0T0 291 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 EP400NLQ6ZTU2 488 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 TMEM192Q8IY95 271 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 TRAPPC12Q8WVT3 735 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 PCYT2Q99447 389 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 UBE2ZQ9H832 354 aaPredicted RBP12.6□□□□□ -0.39
LSAMP-206ENST00000498645 MYO7AQ13402 2215 aa12.6□□□□□ -0.39
LSAMP-206ENST00000498645 ATG2AQ2TAZ0 1938 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 MBLAC1A4D2B0 266 aaPredicted RBP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 M0QZ92 97 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 IBSPP21815 317 aaPredicted RBP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 KCNA5P22460 613 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 CTNNB1P35222 781 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 APOBRQ0VD83 1088 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 ITGB3BPQ13352 177 aaPredicted RBP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 CEP55Q53EZ4 464 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 JAKMIP3Q5VZ66 844 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 TSHZ1Q6ZSZ6 1077 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 Q6ZUG5 572 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 MRPL38Q96DV4 380 aaKnown RBP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 IL17RAQ96F46 866 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 SAMD11Q96NU1 681 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 AGO4Q9HCK5 861 aaKnown RBP12.59□□□□□ -0.39
LSAMP-206ENST00000498645 BARHL2Q9NY43 387 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 RAPGEFL1Q9UHV5 662 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 NFASCO94856 1347 aa12.59□□□□□ -0.39
LSAMP-206ENST00000498645 COL4A6Q14031 1691 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.4
LSAMP-206ENST00000498645 RRN3P2A6NIE6 340 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 H3BNC9 293 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 hCG_1984214I3L0E3 225 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 BACH1O14867 736 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 HMGB1P09429 215 aaKnown RBP12.58□□□□□ -0.4
LSAMP-206ENST00000498645 CD52P31358 61 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 SREBF1P36956 1147 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 STAT5BP51692 787 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 TTC3P53804 2025 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 AP3B2Q13367 1082 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 PLCB4Q15147 1175 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 TSGA10IPQ3SY00 556 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 TIGD5Q53EQ6 642 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 FBXO47Q5MNV8 452 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 IER5Q5VY09 327 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 RPAINQ86UA6 219 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 FIBCD1Q8N539 461 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 ZNF713Q8N859 430 aaPredicted RBP12.58□□□□□ -0.4
LSAMP-206ENST00000498645 EVPLQ92817 2033 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 TNPO1Q92973 898 aaKnown RBP12.58□□□□□ -0.4
LSAMP-206ENST00000498645 BRF1Q92994 677 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 FAM217BQ9NTX9 383 aaPredicted RBP12.58□□□□□ -0.4
LSAMP-206ENST00000498645 TRPV2Q9Y5S1 764 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 ADGRA3Q8IWK6 1321 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 KIAA1671Q9BY89 1806 aa12.58□□□□□ -0.4
LSAMP-206ENST00000498645 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 ENPP3O14638 875 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 ADD1P35611 737 aaKnown RBP12.57□□□□□ -0.4
LSAMP-206ENST00000498645 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 AGO3Q9H9G7 860 aaKnown RBP12.57□□□□□ -0.4
LSAMP-206ENST00000498645 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
LSAMP-206ENST00000498645 CCDC196A0A1B0GTZ2 297 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 FAM86B1E9PN63 330 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 H3BQ06 376 aaPredicted RBP12.56□□□□□ -0.4
LSAMP-206ENST00000498645 MEIS1O00470 390 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 CCNE2O96020 404 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 FAM86B2P0C5J1 330 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 SCG2P13521 617 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms