RNA–Protein interactions for RNA: ENST00000498574.1

IGKV1-39-201, Transcript of immunoglobulin kappa variable 1-39 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV1-39, Length 398 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39-201ENST00000498574 IGSF9Q9P2J2 1179 aa9.42□□□□□ -0.9
IGKV1-39-201ENST00000498574 PUF60Q9UHX1 559 aaKnown RBP9.42□□□□□ -0.9
IGKV1-39-201ENST00000498574 HCFC2Q9Y5Z7 792 aa9.42□□□□□ -0.9
IGKV1-39-201ENST00000498574 FANCMQ8IYD8 2048 aa9.42□□□□□ -0.9
IGKV1-39-201ENST00000498574 PNMA6EA0A0J9YXQ4 647 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 TCRBV5S4A2TA0A5A2 114 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 TMEM8BA6NDV4 472 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 MBD4O95243 580 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 STAG3L1P0CL83 205 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 RPS6P62753 249 aaKnown RBP9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 SOWAHCQ53LP3 525 aaPredicted RBP9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 PRR23BQ6ZRT6 265 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 KCTD1Q719H9 257 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 NPAS4Q8IUM7 802 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 LURAP1LQ8IV03 231 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 FRAT1Q92837 279 aaPredicted RBP9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 GPR20Q99678 358 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 RNPEPQ9H4A4 650 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 NGRNQ9NPE2 291 aaKnown RBP9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 ANKFY1Q9P2R3 1169 aa9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 DDX41Q9UJV9 622 aaKnown RBP9.41□□□□□ -0.9
IGKV1-39-201ENST00000498574 GDF9O60383 454 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 LILRB5O75023 590 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 CHRNA1P02708 482 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 NEFLP07196 543 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 SMIM10L2AP0DMW4 78 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 SMIM10L2BP0DMW5 78 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 GNAT1P11488 350 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 TRIM27P14373 513 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 HOXC8P31273 242 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 GATMP50440 423 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 AAMPQ13685 434 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 LPIN1Q14693 890 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 NONOQ15233 471 aaKnown RBP eCLIP9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 RCSD1Q6JBY9 416 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 KANK3Q6NY19 840 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 CLEC4DQ8WXI8 215 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 EHMT1Q9H9B1 1298 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 RAB23Q9ULC3 237 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 LZTS1Q9Y250 596 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 MYH8P13535 1937 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 NBEAQ8NFP9 2946 aa9.4□□□□□ -0.9
IGKV1-39-201ENST00000498574 LRP3O75074 770 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 LRRN2O75325 713 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 HOXD8P13378 290 aaPredicted RBP9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 LPAL2Q16609 132 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 PRR23CQ6ZRP0 262 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 CCDC149Q6ZUS6 474 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 TMC7Q7Z402 723 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 PJA1Q8NG27 643 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 MRPS27Q92552 414 aaKnown RBP9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 EAF2Q96CJ1 260 aaPredicted RBP9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 C16orf70Q9BSU1 422 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 BCO2Q9BYV7 579 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 FOXQ1Q9C009 403 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 ARHGEF3Q9NR81 526 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 SEMA4GQ9NTN9 838 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 SETD4Q9NVD3 440 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 LRFN2Q9ULH4 789 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 MRVI1Q9Y6F6 885 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 SLC4A4Q9Y6R1 1079 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 U3KPZ7 1027 aaPredicted RBP9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 TTC3P53804 2025 aa9.39□□□□□ -0.91
IGKV1-39-201ENST00000498574 H3BRB1 525 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 RETP07949 1114 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 STXBP2Q15833 593 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 LAIR1Q6GTX8 287 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 DCLRE1AQ6PJP8 1040 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 RASGRP2Q7LDG7 609 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 RTN4RL1Q86UN2 441 aaPredicted RBP9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 GPR152Q8TDT2 470 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 RSAD2Q8WXG1 361 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 LINC01599Q8WXQ3 324 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 SPATA33Q96N06 139 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 RANBP17Q9H2T7 1088 aaKnown RBP9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 CHMP4BQ9H444 224 aaKnown RBP9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 TUT1Q9H6E5 874 aaKnown RBP9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 DZANK1Q9NVP4 752 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 ARPP21Q9UBL0 812 aaPredicted RBP9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 LCTP09848 1927 aa9.38□□□□□ -0.91
IGKV1-39-201ENST00000498574 MINDY4BA8MYZ0 360 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 SORBS3O60504 671 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 CLASP2O75122 1294 aaKnown RBP9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 PRDM1O75626 825 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 SURF6O75683 361 aaKnown RBP9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 GNAI2P04899 355 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 SRFP11831 508 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 IBSPP21815 317 aaPredicted RBP9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 CSRP2Q16527 193 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 HSDL1Q3SXM5 330 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 C20orf194Q5TEA3 1177 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 TMC5Q6UXY8 1006 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 FTSJ3Q8IY81 847 aaKnown RBP9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 SLC44A3Q8N4M1 653 aa9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 MRPL43Q8N983 215 aaKnown RBP9.37□□□□□ -0.91
IGKV1-39-201ENST00000498574 COLGALT1Q8NBJ5 622 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms