RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 PPP1R12CQ9BZL4 782 aa6.22□□□□□ -1.41
NF1-217ENST00000498569 API5Q9BZZ5 524 aaKnown RBP6.22□□□□□ -1.41
NF1-217ENST00000498569 EHD4Q9H223 541 aa6.22□□□□□ -1.41
NF1-217ENST00000498569 SH2D4AQ9H788 454 aa6.22□□□□□ -1.41
NF1-217ENST00000498569 CXXC1Q9P0U4 656 aaPredicted RBP6.22□□□□□ -1.41
NF1-217ENST00000498569 NRBP1Q9UHY1 535 aa6.22□□□□□ -1.41
NF1-217ENST00000498569 PTPRSQ13332 1948 aa6.22□□□□□ -1.41
NF1-217ENST00000498569 SIP14410 1827 aa6.22□□□□□ -1.41
NF1-217ENST00000498569 TRIP12Q14669 1992 aaPredicted RBP6.22□□□□□ -1.41
NF1-217ENST00000498569 LINC01387J3KSC0 135 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 OPLAHO14841 1288 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 TLR3O15455 904 aaKnown RBP6.21□□□□□ -1.42
NF1-217ENST00000498569 ANP32CO43423 234 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 ADAMTS4O75173 837 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 IDH1O75874 414 aaKnown RBP6.21□□□□□ -1.42
NF1-217ENST00000498569 WISP1O95388 367 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 SLC25A27O95847 323 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 CYP2E1P05181 493 aaPredicted RBP6.21□□□□□ -1.42
NF1-217ENST00000498569 POLR3DP05423 398 aaPredicted RBP6.21□□□□□ -1.42
NF1-217ENST00000498569 CSF2RAP15509 400 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 SHMT1P34896 483 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 ACLYP53396 1101 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 TFF2Q03403 129 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 SEPT2Q15019 361 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 TMEM31Q5JXX7 168 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 TMEM240Q5SV17 173 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 TREML1Q86YW5 311 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 CLEC10AQ8IUN9 316 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 KLHL23Q8NBE8 558 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 GALNT11Q8NCW6 608 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 SPACA7Q96KW9 195 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 GLT1D1Q96MS3 346 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 NKX2-4Q9H2Z4 354 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 SPC25Q9HBM1 224 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 ADGRE2Q9UHX3 823 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 ZHX1Q9UKY1 873 aaPredicted RBP6.21□□□□□ -1.42
NF1-217ENST00000498569 TBX21Q9UL17 535 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 SYNGAP1Q96PV0 1343 aa6.21□□□□□ -1.42
NF1-217ENST00000498569 CFAP54Q96N23 3096 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 A0A0U1RQG5 324 aaPredicted RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 HMX2A2RU54 273 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 USP17L12C9JPN9 530 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 USP17L21D6R901 530 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 SART1O43290 800 aaKnown RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 IGSF3O75054 1194 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 LGR5O75473 907 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 SMNDC1O75940 238 aaKnown RBP eCLIP6.2□□□□□ -1.42
NF1-217ENST00000498569 PGK2P07205 417 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 C6orf222P0C671 652 aaPredicted RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 ACRP10323 421 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 KCNQ1P51787 676 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 MTX1Q13505 466 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 KCNA10Q16322 511 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 DUOXA2Q1HG44 320 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 CRTC2Q53ET0 693 aaPredicted RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 ZNF365Q70YC5 407 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 ANKMY2Q8IV38 441 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 SPICE1Q8N0Z3 855 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 MAGEB6Q8N7X4 407 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 PCSK9Q8NBP7 692 aaKnown RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 GIMAP7Q8NHV1 300 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 ATG4CQ96DT6 458 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 FAM83CQ9BQN1 747 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 LRFN3Q9BTN0 628 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 IL23AQ9NPF7 189 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 PIH1D3Q9NQM4 214 aaKnown RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 TFIP11Q9UBB9 837 aaKnown RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 NOB1Q9ULX3 412 aaKnown RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 USP20Q9Y2K6 914 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 HIF3AQ9Y2N7 669 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 KCNMB2Q9Y691 235 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 GREB1LQ9C091 1923 aaPredicted RBP6.2□□□□□ -1.42
NF1-217ENST00000498569 ELP1O95163 1332 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 ZNF521Q96K83 1311 aa6.2□□□□□ -1.42
NF1-217ENST00000498569 NLRC5Q86WI3 1866 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 SPTBN4Q9H254 2564 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 WDR46O15213 610 aaKnown RBP6.19□□□□□ -1.42
NF1-217ENST00000498569 FGBP02675 491 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 GNAI2P04899 355 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 ZNF865P0CJ78 1059 aaPredicted RBP6.19□□□□□ -1.42
NF1-217ENST00000498569 CDC27P30260 824 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 WEE1P30291 646 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 GUCY1A2P33402 732 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 COPB2P35606 906 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 ZAP70P43403 619 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 PLCD1P51178 756 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 ICA1Q05084 483 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 TMEM132BQ14DG7 1078 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 TNNI3KQ59H18 835 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 RASIP1Q5U651 963 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 ANKRD34AQ69YU3 496 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 TMEM179Q6ZVK1 233 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 C16orf59Q7L2K0 433 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 OTOP2Q7RTS6 562 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 FAM20CQ8IXL6 584 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 SHKBP1Q8TBC3 707 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 HERVK_113Q902F9 699 aa6.19□□□□□ -1.42
NF1-217ENST00000498569 CRNKL1Q9BZJ0 848 aaKnown RBP6.19□□□□□ -1.42
NF1-217ENST00000498569 FAM184BQ9ULE4 1060 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms