RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 LAMA3Q16787 3333 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 SLC37A4O43826 429 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 ATG7O95352 703 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 SFNP31947 248 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 JAK3P52333 1124 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
MRPL55-234ENST00000497758 GRIK4Q16099 956 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
MRPL55-234ENST00000497758 SWSAP1Q6NVH7 229 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 ABHD15Q6UXT9 468 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 ETNPPLQ8TBG4 499 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 AFAP1L1Q8TED9 768 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 GJA10Q969M2 543 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 PCYT2Q99447 389 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 WNT8AQ9H1J5 351 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 FOXP1Q9H334 677 aaPredicted RBP13.26□□□□□ -0.29
MRPL55-234ENST00000497758 ZNF302Q9NR11 478 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 DISC1Q9NRI5 854 aa13.26□□□□□ -0.29
MRPL55-234ENST00000497758 POTEB3A0JP26 581 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 H3BQV1 296 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 TREHO43280 583 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 PSMD10O75832 226 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 BAG4O95429 457 aaKnown RBP13.25□□□□□ -0.29
MRPL55-234ENST00000497758 GJB2P29033 226 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 HOXC8P31273 242 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 IGBP1P78318 339 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 PSRC1Q6PGN9 363 aaPredicted RBP13.25□□□□□ -0.29
MRPL55-234ENST00000497758 POTEBQ6S5H4 581 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 CCDC60Q8IWA6 550 aaPredicted RBP13.25□□□□□ -0.29
MRPL55-234ENST00000497758 RPUSD2Q8IZ73 545 aaKnown RBP13.25□□□□□ -0.29
MRPL55-234ENST00000497758 SCLYQ96I15 445 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
MRPL55-234ENST00000497758 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 CTAGE1Q96RT6 745 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 UNC45AQ9H3U1 944 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 IL23AQ9NPF7 189 aa13.25□□□□□ -0.29
MRPL55-234ENST00000497758 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 RRN3P2A6NIE6 340 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 TBX3O15119 743 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 NEMFO60524 1076 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 ACRP10323 421 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 CKBP12277 381 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 INSRRP14616 1297 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 SELPP16109 830 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 ATP2B1P20020 1258 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 RFC2P35250 354 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 THPOP40225 353 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 EPHB4P54760 987 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 HIC1Q14526 733 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 PLCB4Q15147 1175 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 SHHQ15465 462 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 CALCRLQ16602 461 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 C9orf50Q5SZB4 431 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 LRRC8DQ7L1W4 858 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 NOSTRINQ8IVI9 506 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 SLFN12Q8IYM2 578 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 RDM1Q8NG50 284 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 DHX38Q92620 1227 aaKnown RBP13.24□□□□□ -0.29
MRPL55-234ENST00000497758 MTIF3Q9H2K0 278 aaKnown RBP13.24□□□□□ -0.29
MRPL55-234ENST00000497758 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 GABBR1Q9UBS5 961 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
MRPL55-234ENST00000497758 NOL7Q9UMY1 257 aaKnown RBP13.24□□□□□ -0.29
MRPL55-234ENST00000497758 HBP1O60381 514 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 PARNO95453 639 aaKnown RBP13.23□□□□□ -0.29
MRPL55-234ENST00000497758 PFKMP08237 780 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 IQCF3P0C7M6 154 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 RBL2Q08999 1139 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 TRMT1LQ7Z2T5 733 aaKnown RBP13.23□□□□□ -0.29
MRPL55-234ENST00000497758 DEFB128Q7Z7B8 93 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 RSPH3Q86UC2 560 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 FAM167AQ96KS9 214 aa13.23□□□□□ -0.29
MRPL55-234ENST00000497758 FTOQ9C0B1 505 aaKnown RBP eCLIP13.23□□□□□ -0.29
MRPL55-234ENST00000497758 MAFBQ9Y5Q3 323 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-234ENST00000497758 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-234ENST00000497758 CAND2O75155 1236 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 FGBP02675 491 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 ACTN1P12814 892 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 MCM7P33993 719 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 PPP2R5CQ13362 524 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 CUL4AQ13619 759 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 TRIM71Q2Q1W2 868 aaKnown RBP13.22□□□□□ -0.29
MRPL55-234ENST00000497758 TMEM240Q5SV17 173 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 ZNF618Q5T7W0 954 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 ZNF365Q70YC5 407 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-234ENST00000497758 WNT8BQ93098 351 aa13.22□□□□□ -0.29
MRPL55-234ENST00000497758 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.22□□□□□ -0.294e-8■■■■□ 26.7
MRPL55-234ENST00000497758 IGSF9BQ9UPX0 1349 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 MBLAC1A4D2B0 266 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-234ENST00000497758 RSPH10B2B2RC85 870 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms