RNA–Protein interactions for RNA: ENST00000497726.5

CCDC58-206, Transcript of coiled-coil domain containing 58, humanhuman

TSL 5 BASIC

Gene CCDC58, Length 438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-206ENST00000497726 CALM3P0DP25 149 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 LIFRP42702 1097 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 PURAQ00577 322 aaKnown RBP11.28□□□□□ -0.6
CCDC58-206ENST00000497726 SMAD4Q13485 552 aaKnown RBP11.28□□□□□ -0.6
CCDC58-206ENST00000497726 PGM5Q15124 567 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 PWP2Q15269 919 aaKnown RBP11.28□□□□□ -0.6
CCDC58-206ENST00000497726 UBE2SQ16763 222 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 RTN1Q16799 776 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 TMEM105Q8N8V8 129 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 CUL5Q93034 780 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
CCDC58-206ENST00000497726 RBM47A0AV96 593 aaKnown RBP11.27□□□□□ -0.61
CCDC58-206ENST00000497726 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 LOC730098B7Z3J9 87 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC58-206ENST00000497726 ZBTB43O43298 467 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 REC8O95072 547 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 GJB5O95377 273 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 GH1P01241 217 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 MMP3P08254 477 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 CASTP20810 708 aaKnown RBP11.27□□□□□ -0.61
CCDC58-206ENST00000497726 CCND2P30279 289 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 RFC2P35250 354 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 GNAQP50148 359 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 NKX3-2P78367 333 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 SP4Q02446 784 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 KRT32Q14532 448 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 CTC1Q2NKJ3 1217 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.61
CCDC58-206ENST00000497726 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.61
CCDC58-206ENST00000497726 TMTC2Q8N394 836 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 FANCBQ8NB91 859 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 LZTS2Q9BRK4 669 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
CCDC58-206ENST00000497726 MTA3Q9BTC8 594 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 NSUN3Q9H649 340 aaKnown RBP11.27□□□□□ -0.61
CCDC58-206ENST00000497726 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 PKD2L1Q9P0L9 805 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 Q9Y3F1 56 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 SNX14Q9Y5W7 946 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 ASPMQ8IZT6 3477 aa11.27□□□□□ -0.61
CCDC58-206ENST00000497726 TANC1Q9C0D5 1861 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 HSPA4P34932 840 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
CCDC58-206ENST00000497726 ARHGAP1Q07960 439 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 TRAF1Q13077 416 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 Q6ZUG5 572 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 SGMS1Q86VZ5 419 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 KCNG4Q8TDN1 519 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 BRF1Q92994 677 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 PGBD1Q96JS3 809 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 RIPOR3Q96MK2 946 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 IWS1Q96ST2 819 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 MAP3K14Q99558 947 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
CCDC58-206ENST00000497726 SH2B1Q9NRF2 756 aaPredicted RBP11.26□□□□□ -0.61
CCDC58-206ENST00000497726 TBX10O75333 385 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 EIF3JO75822 258 aaKnown RBP11.25□□□□□ -0.61
CCDC58-206ENST00000497726 GGPS1O95749 300 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 SUPT20HL2P0C7V6 817 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 PYGBP11216 843 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 UBA1P22314 1058 aaKnown RBP11.25□□□□□ -0.61
CCDC58-206ENST00000497726 NAPAP54920 295 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 CBX2Q14781 532 aaPredicted RBP11.25□□□□□ -0.61
CCDC58-206ENST00000497726 TCTN1Q2MV58 587 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 EPC2Q52LR7 807 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
CCDC58-206ENST00000497726 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
CCDC58-206ENST00000497726 SEZ6LQ9BYH1 1024 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
CCDC58-206ENST00000497726 CD207Q9UJ71 328 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 NOD1Q9Y239 953 aa11.25□□□□□ -0.61
CCDC58-206ENST00000497726 LINC01565O15544 149 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 CDC27P30260 824 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC58-206ENST00000497726 METAP2P50579 478 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC58-206ENST00000497726 GHRHRQ02643 423 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 HYAL1Q12794 435 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 GPM6BQ13491 265 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 GPNMBQ14956 572 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 RSPO4Q2I0M5 234 aaPredicted RBP11.24□□□□□ -0.61
CCDC58-206ENST00000497726 RETREG2Q8NC44 543 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
CCDC58-206ENST00000497726 PCDHGC5Q9Y5F6 944 aa11.24□□□□□ -0.61
CCDC58-206ENST00000497726 TRIP12Q14669 1992 aaPredicted RBP11.24□□□□□ -0.61
CCDC58-206ENST00000497726 A6NJR5 290 aa11.23□□□□□ -0.61
CCDC58-206ENST00000497726 H3BNC9 293 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms