RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SPATA20Q8TB22 786 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 NEK9Q8TD19 979 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 LRRC15Q8TF66 581 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 UNC45AQ9H3U1 944 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 TSPY26PQ9H489 355 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 TUFT1Q9NNX1 390 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 KBTBD4Q9NVX7 518 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 SLC5A4Q9NY91 659 aa15.89■□□□□ 0.13
VPS26A-209ENST00000497564 FSD2A1L4K1 749 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 H0YGN5 161 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 EML1O00423 815 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 GTPBP6O43824 516 aaPredicted RBP15.88■□□□□ 0.13
VPS26A-209ENST00000497564 SPATA31C1P0DKV0 1188 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 KCNA2P16389 499 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 KRT76Q01546 638 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 TYRO3Q06418 890 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 PNOCQ13519 176 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 EPHA7Q15375 998 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 SASS6Q6UVJ0 657 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 ANKLE1Q8NAG6 615 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 RDM1Q8NG50 284 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 DPF3Q92784 378 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 LENG1Q96BZ8 264 aaPredicted RBP15.88■□□□□ 0.13
VPS26A-209ENST00000497564 UIMC1Q96RL1 719 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 HSD17B14Q9BPX1 270 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 BLOC1S4Q9NUP1 217 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 PCDH10Q9P2E7 1040 aa15.88■□□□□ 0.13
VPS26A-209ENST00000497564 SEPT4O43236 478 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 ATP9AO75110 1047 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 MED24O75448 989 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 SNAI1O95863 264 aaPredicted RBP15.87■□□□□ 0.13
VPS26A-209ENST00000497564 TGFB3P10600 412 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 SFNP31947 248 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 SARSP49591 514 aaKnown RBP15.87■□□□□ 0.13
VPS26A-209ENST00000497564 DPYDQ12882 1025 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 ECM1Q16610 540 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 ZNF746Q6NUN9 644 aaPredicted RBP15.87■□□□□ 0.13
VPS26A-209ENST00000497564 KCNV1Q6PIU1 500 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 MAMDC4Q6UXC1 1216 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 NECAB2Q7Z6G3 386 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 GAS2L3Q86XJ1 694 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 CATSPER3Q86XQ3 398 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
VPS26A-209ENST00000497564 RAD54LQ92698 747 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 MTRQ99707 1265 aa15.87■□□□□ 0.13
VPS26A-209ENST00000497564 EIF2AK1Q9BQI3 630 aaKnown RBP15.87■□□□□ 0.13
VPS26A-209ENST00000497564 LAMA3Q16787 3333 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 POTEB3A0JP26 581 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 SMC2O95347 1197 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 CAVIN2O95810 425 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 ZNF865P0CJ78 1059 aaPredicted RBP15.86■□□□□ 0.13
VPS26A-209ENST00000497564 COL6A1P12109 1028 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 JAK3P52333 1124 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 ZRSR1Q15695 479 aaKnown RBP15.86■□□□□ 0.13
VPS26A-209ENST00000497564 STX1AQ16623 288 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 CNNM4Q6P4Q7 775 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 POTEBQ6S5H4 581 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 GRAMD1CQ8IYS0 662 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
VPS26A-209ENST00000497564 TRIML1Q8N9V2 468 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 GIMAP8Q8ND71 665 aaPredicted RBP15.86■□□□□ 0.13
VPS26A-209ENST00000497564 SMARCE1Q969G3 411 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 LRRC27Q9C0I9 530 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 TCEAL9Q9UHQ7 104 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 PCDHA5Q9Y5H7 936 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 TRIOBPQ9H2D6 2365 aa15.86■□□□□ 0.13
VPS26A-209ENST00000497564 AFMP43652 599 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 AMPD3Q01432 767 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 GJC2Q5T442 439 aaPredicted RBP15.85■□□□□ 0.13
VPS26A-209ENST00000497564 SV2BQ7L1I2 683 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 ARMCX2Q7L311 632 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 MIER3Q7Z3K6 550 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 KCNK18Q7Z418 384 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
VPS26A-209ENST00000497564 ERCC4Q92889 916 aaPredicted RBP15.85■□□□□ 0.13
VPS26A-209ENST00000497564 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 PLIN2Q99541 437 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 C7orf25Q9BPX7 421 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 HTATIP2Q9BUP3 242 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 C11orf49Q9H6J7 331 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 ANO10Q9NW15 660 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 KIAA1024Q9UPX6 916 aa15.85■□□□□ 0.13
VPS26A-209ENST00000497564 WDR64B1ANS9 1081 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 DDX39AO00148 427 aaKnown RBP15.84■□□□□ 0.13
VPS26A-209ENST00000497564 ADCY6O43306 1168 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 CHMP2AO43633 222 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 SLITRK3O94933 977 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 CAPN2P17655 700 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 NLRP12P59046 1061 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 SEPT14Q6ZU15 432 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 DYDC2Q96IM9 177 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
VPS26A-209ENST00000497564 VTA1Q9NP79 307 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.84■□□□□ 0.13
VPS26A-209ENST00000497564 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
VPS26A-209ENST00000497564 RBM47A0AV96 593 aaKnown RBP15.83■□□□□ 0.12
VPS26A-209ENST00000497564 GOLGA6L3A6NEY3 463 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms