RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ATP8A1Q9Y2Q0 1164 aa5.59□□□□□ -1.51
SMC4-225ENST00000497203 SH3D21A4FU49 640 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 AMY2AP04746 511 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 PDE6AP16499 860 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 AMY2BP19961 511 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 CDK11BP21127 795 aaKnown RBP5.58□□□□□ -1.52
SMC4-225ENST00000497203 CTSWP56202 376 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 ZNF460Q14592 562 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 CDCA2Q69YH5 1023 aaPredicted RBP5.58□□□□□ -1.52
SMC4-225ENST00000497203 LIPIQ6XZB0 460 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 ARHGAP36Q6ZRI8 547 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 C16orf59Q7L2K0 433 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 OSTM1Q86WC4 334 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 KIF18BQ86Y91 864 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 MARCH10Q8NA82 808 aaPredicted RBP5.58□□□□□ -1.52
SMC4-225ENST00000497203 KYQ8NBH2 561 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
SMC4-225ENST00000497203 WNK4Q96J92 1243 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 KCNC2Q96PR1 638 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 ORAI3Q9BRQ5 295 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 PCDH18Q9HCL0 1135 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 NGRNQ9NPE2 291 aaKnown RBP5.58□□□□□ -1.52
SMC4-225ENST00000497203 CATSPERZQ9NTU4 200 aa5.58□□□□□ -1.52
SMC4-225ENST00000497203 CCDC66A2RUB6 948 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 ALG1L2C9J202 215 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 KPNA6O60684 536 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 CKMP06732 381 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 THBS2P35442 1172 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 DNM2P50570 870 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 EPHA5P54756 1037 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 SLURP1P55000 103 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 JAM2P57087 298 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 ST5P78524 1137 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 ADAM9Q13443 819 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 DHCR24Q15392 516 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 GPR19Q15760 415 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 PAN2Q504Q3 1202 aaKnown RBP5.57□□□□□ -1.52
SMC4-225ENST00000497203 PIK3R6Q5UE93 754 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 PKN3Q6P5Z2 889 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 TMC5Q6UXY8 1006 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 KCTD1Q719H9 257 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.57□□□□□ -1.52
SMC4-225ENST00000497203 PROSER1Q86XN7 944 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 PTRH1Q86Y79 214 aaKnown RBP5.57□□□□□ -1.52
SMC4-225ENST00000497203 AFAP1L2Q8N4X5 818 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 UBR7Q8N806 425 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 SYT8Q8NBV8 401 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 OR2W6PQ8NHA6 318 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 ATL2Q8NHH9 583 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 ZSWIM3Q96MP5 696 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 CELF4Q9BZC1 486 aaKnown RBP5.57□□□□□ -1.52
SMC4-225ENST00000497203 PDGFDQ9GZP0 370 aaPredicted RBP5.57□□□□□ -1.52
SMC4-225ENST00000497203 SAMD15Q9P1V8 674 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 SRPK3Q9UPE1 567 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 COQ6Q9Y2Z9 468 aa5.57□□□□□ -1.52
SMC4-225ENST00000497203 ZNF561-AS1K7EIQ3 104 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 ACOT7O00154 380 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 MAN2B1O00754 1011 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 KCNK3O14649 394 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 FAHP16930 419 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 KCNA6P17658 529 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 KRT15P19012 456 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 SCNN1BP51168 640 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 RTP5Q14D33 572 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 SART3Q15020 963 aaKnown RBP5.56□□□□□ -1.52
SMC4-225ENST00000497203 PCBP1Q15365 356 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMC4-225ENST00000497203 ABHD17CQ6PCB6 329 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 DDX42Q86XP3 938 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMC4-225ENST00000497203 RPUSD2Q8IZ73 545 aaKnown RBP5.56□□□□□ -1.52
SMC4-225ENST00000497203 CISD2Q8N5K1 135 aaKnown RBP5.56□□□□□ -1.52
SMC4-225ENST00000497203 SPATA25Q9BR10 227 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 MTFR1LQ9H019 292 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 ZCCHC4Q9H5U6 513 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMC4-225ENST00000497203 METTL14Q9HCE5 456 aaKnown RBP5.56□□□□□ -1.52
SMC4-225ENST00000497203 SMURF1Q9HCE7 757 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 CABP5Q9NP86 173 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 PARD6AQ9NPB6 346 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 HOMER2Q9NSB8 354 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 DDX56Q9NY93 547 aaKnown RBP5.56□□□□□ -1.52
SMC4-225ENST00000497203 HSPBP1Q9NZL4 362 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 NUB1Q9Y5A7 615 aa5.56□□□□□ -1.52
SMC4-225ENST00000497203 ADAMTS20P59510 1910 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 FAM83GA6ND36 823 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 FAM90A27PA6NNH2 459 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 BRINP1O60477 761 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 CRY1Q16526 586 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 PRR31Q5SQ13 230 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 SP8Q8IXZ3 490 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 CARFQ8N187 725 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 TTLL6Q8N841 843 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 IGSF22Q8N9C0 903 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 PRPF38AQ8NAV1 312 aaKnown RBP5.55□□□□□ -1.52
SMC4-225ENST00000497203 FEZF2Q8TBJ5 459 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 USP7Q93009 1102 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 C20orf173Q96LM9 149 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 LUC7LQ9NQ29 371 aaKnown RBP5.55□□□□□ -1.52
SMC4-225ENST00000497203 NTMQ9P121 344 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 ZKSCAN5Q9Y2L8 839 aa5.55□□□□□ -1.52
SMC4-225ENST00000497203 M0R2C6 588 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms