RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 IPO9Q96P70 1041 aaKnown RBP5.13□□□□□ -1.59
VPS26A-208ENST00000497022 ALG1Q9BT22 464 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 PDGFDQ9GZP0 370 aaPredicted RBP5.13□□□□□ -1.59
VPS26A-208ENST00000497022 MEGF9Q9H1U4 602 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 AQP7O14520 342 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 LTFP02788 710 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 C6orf222P0C671 652 aaPredicted RBP5.12□□□□□ -1.59
VPS26A-208ENST00000497022 SUMO1P63165 101 aaKnown RBP5.12□□□□□ -1.59
VPS26A-208ENST00000497022 LONRF2Q1L5Z9 754 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 MIIPQ5JXC2 388 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 TMC5Q6UXY8 1006 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 PROSER1Q86XN7 944 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 Q8TCH9 128 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 EXOC2Q96KP1 924 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 ZSWIM3Q96MP5 696 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 DEPDC7Q96QD5 511 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 TMEM209Q96SK2 561 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 RBPJLQ9UBG7 517 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 FTSJ1Q9UET6 329 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 DSEQ9UL01 958 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 TELO2Q9Y4R8 837 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 NUB1Q9Y5A7 615 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 KDM2BQ8NHM5 1336 aa5.12□□□□□ -1.59
VPS26A-208ENST00000497022 NPIPB8E9PQR5 432 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 FAHP16930 419 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 EPHA5P54756 1037 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 MLLT6P55198 1093 aaPredicted RBP5.11□□□□□ -1.59
VPS26A-208ENST00000497022 ABHD18Q0P651 414 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 PAK1Q13153 545 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 FOXE3Q13461 319 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 PAN2Q504Q3 1202 aaKnown RBP5.11□□□□□ -1.59
VPS26A-208ENST00000497022 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.11□□□□□ -1.59
VPS26A-208ENST00000497022 DHRS4Q9BTZ2 278 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 BARX1Q9HBU1 254 aaPredicted RBP5.11□□□□□ -1.59
VPS26A-208ENST00000497022 SNTG2Q9NY99 539 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 CROTQ9UKG9 612 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 PCDHA8Q9Y5H6 950 aa5.11□□□□□ -1.59
VPS26A-208ENST00000497022 TCRBV5S4A2TA0A5A2 114 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 WNT9AO14904 365 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 TGM1P22735 817 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 GABREP78334 506 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 PRKD1Q15139 912 aaPredicted RBP5.1□□□□□ -1.59
VPS26A-208ENST00000497022 SOGA3Q5TF21 947 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 VASNQ6EMK4 673 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 RNF207Q6ZRF8 634 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 KCTD1Q719H9 257 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 MTDHQ86UE4 582 aaKnown RBP5.1□□□□□ -1.59
VPS26A-208ENST00000497022 SH3RF2Q8TEC5 729 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 MKL1Q969V6 931 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 CHFRQ96EP1 664 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 SEC61A2Q9H9S3 476 aa5.1□□□□□ -1.59
VPS26A-208ENST00000497022 MRPS23Q9Y3D9 190 aaKnown RBP5.1□□□□□ -1.59
VPS26A-208ENST00000497022 B4GALT4O60513 344 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 CKMP06732 381 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 GUCY1A3Q02108 690 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 DPTQ07507 201 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 NFATC3Q12968 1075 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 SF3A1Q15459 793 aaKnown RBP5.09□□□□□ -1.59
VPS26A-208ENST00000497022 ZC3H12BQ5HYM0 836 aaKnown RBP5.09□□□□□ -1.59
VPS26A-208ENST00000497022 DTX3Q8N9I9 347 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 PCDH19Q8TAB3 1148 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 ZCCHC14Q8WYQ9 949 aaKnown RBP5.09□□□□□ -1.59
VPS26A-208ENST00000497022 ZNF503Q96F45 646 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 SRPK1Q96SB4 655 aaKnown RBP5.09□□□□□ -1.59
VPS26A-208ENST00000497022 DNAJC7Q99615 494 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 PTPN18Q99952 460 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 CD244Q9BZW8 370 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 DLL4Q9NR61 685 aa5.09□□□□□ -1.59
VPS26A-208ENST00000497022 ACOT7O00154 380 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 ARVCFO00192 962 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 ENO2P09104 434 aaPredicted RBP5.08□□□□□ -1.6
VPS26A-208ENST00000497022 NAT1P18440 290 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 PHF19Q5T6S3 580 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 CD276Q5ZPR3 534 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 ARHGAP36Q6ZRI8 547 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 C16orf59Q7L2K0 433 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 JMYQ8N9B5 988 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 PMFBP1Q8TBY8 1022 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 FBXW5Q969U6 566 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 CATSPERZQ9NTU4 200 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 ADAM29Q9UKF5 820 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 PCDHA9Q9Y5H5 950 aa5.08□□□□□ -1.6
VPS26A-208ENST00000497022 ZNF202O95125 648 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 CRTAMO95727 393 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 SRGAP2CP0DJJ0 459 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 PYGMP11217 842 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 COL6A1P12109 1028 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 PFKPQ01813 784 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 GPR19Q15760 415 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 SKIDA1Q1XH10 827 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 TRMT10BQ6PF06 316 aaKnown RBP5.07□□□□□ -1.6
VPS26A-208ENST00000497022 OSTM1Q86WC4 334 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 CEP89Q96ST8 783 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 WDR26Q9H7D7 661 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 SRPK3Q9UPE1 567 aa5.07□□□□□ -1.6
VPS26A-208ENST00000497022 ZNF839A8K0R7 811 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 GSTA4O15217 222 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 CNOT4O95628 575 aaKnown RBP5.06□□□□□ -1.6
VPS26A-208ENST00000497022 AMY2AP04746 511 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 CHGBP05060 677 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms