RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 IGKV6D-21A0A0A0MT36 114 aa20.48■□□□□ 0.87
RGP1-202ENST00000496906 POLR2DO15514 142 aaKnown RBP20.48■□□□□ 0.87
RGP1-202ENST00000496906 DYNC1LI2O43237 492 aaPredicted RBP20.48■□□□□ 0.87
RGP1-202ENST00000496906 NR1I2O75469 434 aa20.48■□□□□ 0.87
RGP1-202ENST00000496906 PLCG1P19174 1290 aa20.48■□□□□ 0.87
RGP1-202ENST00000496906 TCF7P36402 384 aaPredicted RBP20.48■□□□□ 0.87
RGP1-202ENST00000496906 CTTNQ14247 550 aaKnown RBP20.48■□□□□ 0.87
RGP1-202ENST00000496906 BANK1Q8NDB2 785 aa20.48■□□□□ 0.87
RGP1-202ENST00000496906 RASSF8Q8NHQ8 419 aa20.48■□□□□ 0.87
RGP1-202ENST00000496906 PANK2Q9BZ23 570 aa20.48■□□□□ 0.87
RGP1-202ENST00000496906 NT5C3AQ9H0P0 336 aa20.48■□□□□ 0.87
RGP1-202ENST00000496906 WRAP73Q9P2S5 460 aaPredicted RBP20.48■□□□□ 0.87
RGP1-202ENST00000496906 RARBP10826 455 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 HOXD8P13378 290 aaPredicted RBP20.47■□□□□ 0.87
RGP1-202ENST00000496906 MUTP22033 750 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 E2F4Q16254 413 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 UGCGQ16739 394 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 SLC9C1Q4G0N8 1177 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 SWSAP1Q6NVH7 229 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 FBXO46Q6PJ61 603 aaPredicted RBP20.47■□□□□ 0.87
RGP1-202ENST00000496906 POTEGQ6S5H5 508 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 LRRC15Q8TF66 581 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 CDK5RAP3Q96JB5 506 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 PCYT2Q99447 389 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 PLIN2Q99541 437 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 IGSF9BQ9UPX0 1349 aa20.47■□□□□ 0.87
RGP1-202ENST00000496906 ZNF202O95125 648 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 MMP3P08254 477 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 QARSP47897 775 aaKnown RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 PSMC5P62195 406 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 PKN2Q16513 984 aaKnown RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 NAALADL2Q58DX5 795 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 TPH2Q8IWU9 490 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 DHX58Q96C10 678 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 PYM1Q9BRP8 204 aaKnown RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 AP5M1Q9H0R1 490 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 HMX1Q9NP08 348 aaPredicted RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 DDX19AQ9NUU7 478 aaKnown RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 DACT1Q9NYF0 836 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 GABBR1Q9UBS5 961 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 DDX20Q9UHI6 824 aaKnown RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 KIAA1024Q9UPX6 916 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 A6NJR5 290 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 BACH1O14867 736 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 LGR5O75473 907 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 STAT6P42226 847 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 GJA9P57773 515 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 RRAGBQ5VZM2 374 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 KCNK18Q7Z418 384 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 AFAP1L1Q8TED9 768 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 ATP6V0A1Q93050 837 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 UPF3AQ9H1J1 476 aaKnown RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 ZSWIM4Q9H7M6 989 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 ZNF302Q9NR11 478 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 MAFBQ9Y5Q3 323 aaPredicted RBP20.46■□□□□ 0.87
RGP1-202ENST00000496906 EMSYQ7Z589 1322 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 SYNRGQ9UMZ2 1314 aa20.46■□□□□ 0.87
RGP1-202ENST00000496906 CTAGE5O15320 804 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 MSCO60682 206 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 PPFIA4O75335 1185 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 LYPLA2O95372 231 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 NKX3-2P78367 333 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 IRX5P78411 483 aaPredicted RBP20.45■□□□□ 0.86
RGP1-202ENST00000496906 C4orf19Q8IY42 314 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 KCTD17Q8N5Z5 321 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 IQUBQ8NA54 791 aa20.45■□□□□ 0.86
RGP1-202ENST00000496906 ACTN4O43707 911 aaKnown RBP20.44■□□□□ 0.86
RGP1-202ENST00000496906 ZNF862O60290 1169 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 LGALS2P05162 132 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 CPT1AP50416 773 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 DGKDQ16760 1214 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 KLHL40Q2TBA0 621 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 LONRF3Q496Y0 759 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 UTP14CQ5TAP6 766 aaKnown RBP20.44■□□□□ 0.86
RGP1-202ENST00000496906 FAM160B1Q5W0V3 765 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 TRIM50Q86XT4 487 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.44■□□□□ 0.86
RGP1-202ENST00000496906 AZI2Q9H6S1 392 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 XPNPEP3Q9NQH7 507 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 BLOC1S4Q9NUP1 217 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 STK17AQ9UEE5 414 aa20.44■□□□□ 0.86
RGP1-202ENST00000496906 DKC1O60832 514 aaKnown RBP eCLIP20.43■□□□□ 0.86
RGP1-202ENST00000496906 KINO60870 393 aaKnown RBP20.43■□□□□ 0.86
RGP1-202ENST00000496906 ADAMTS4O75173 837 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 STAT5BP51692 787 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 PSMC6P62333 389 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 FSCN1Q16658 493 aaKnown RBP20.43■□□□□ 0.86
RGP1-202ENST00000496906 PDXDC2PQ6P474 469 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 TIGD1Q96MW7 591 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 SPC25Q9HBM1 224 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 USP25Q9UHP3 1055 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 SERTAD1Q9UHV2 236 aa20.43■□□□□ 0.86
RGP1-202ENST00000496906 MYADML2A6NDP7 307 aa20.42■□□□□ 0.86
RGP1-202ENST00000496906 E9PMD0 336 aa20.42■□□□□ 0.86
RGP1-202ENST00000496906 PGK1P00558 417 aa20.42■□□□□ 0.86
RGP1-202ENST00000496906 C6orf222P0C671 652 aaPredicted RBP20.42■□□□□ 0.86
RGP1-202ENST00000496906 SLFN14P0C7P3 912 aa20.42■□□□□ 0.86
RGP1-202ENST00000496906 ATP4AP20648 1035 aa20.42■□□□□ 0.86
RGP1-202ENST00000496906 BEX3Q00994 111 aa20.42■□□□□ 0.86
RGP1-202ENST00000496906 SKOR2Q2VWA4 1001 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms