RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 ZSWIM3Q96MP5 696 aa6.4□□□□□ -1.38
TRIM4-205ENST00000496896 GPR20Q99678 358 aa6.4□□□□□ -1.38
TRIM4-205ENST00000496896 CD244Q9BZW8 370 aa6.4□□□□□ -1.38
TRIM4-205ENST00000496896 FTSJ1Q9UET6 329 aa6.4□□□□□ -1.38
TRIM4-205ENST00000496896 CROTQ9UKG9 612 aa6.4□□□□□ -1.38
TRIM4-205ENST00000496896 ATP23Q9Y6H3 246 aa6.4□□□□□ -1.38
TRIM4-205ENST00000496896 PLD2O14939 933 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 CYP1A1P04798 512 aaPredicted RBP6.39□□□□□ -1.39
TRIM4-205ENST00000496896 CNR2P34972 360 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 HERVK_113P62684 666 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 PFKPQ01813 784 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 DBPQ10586 325 aaPredicted RBP6.39□□□□□ -1.39
TRIM4-205ENST00000496896 SURF1Q15526 300 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 SKIDA1Q1XH10 827 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 BTBD8Q5XKL5 378 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 PLEKHH3Q7Z736 793 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 OSTM1Q86WC4 334 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 KLHL36Q8N4N3 616 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 MRFAP1L1Q96HT8 127 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 SMURF1Q9HCE7 757 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 KCND1Q9NSA2 647 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 RBPJLQ9UBG7 517 aa6.39□□□□□ -1.39
TRIM4-205ENST00000496896 FAM90A27PA6NNH2 459 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 KLHL18O94889 574 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 PLATP00750 562 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 KNG1P01042 644 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 SRGAP2CP0DJJ0 459 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 JAM2P57087 298 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 BMS1Q14692 1282 aaKnown RBP6.38□□□□□ -1.39
TRIM4-205ENST00000496896 FNDC3BQ53EP0 1204 aaKnown RBP6.38□□□□□ -1.39
TRIM4-205ENST00000496896 EP400NLQ6ZTU2 488 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 PTRH1Q86Y79 214 aaKnown RBP6.38□□□□□ -1.39
TRIM4-205ENST00000496896 DDX1Q92499 740 aaKnown RBP6.38□□□□□ -1.39
TRIM4-205ENST00000496896 SCLYQ96I15 445 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 TRIM39Q9HCM9 518 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 ARHGAP20Q9P2F6 1191 aa6.38□□□□□ -1.39
TRIM4-205ENST00000496896 TCRBV16S1A1N1A0A5B0 115 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 FBXO21O94952 628 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 RASGRP1O95267 797 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 ITGB3P05106 788 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
TRIM4-205ENST00000496896 BRAPQ7Z569 592 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 FERMT3Q86UX7 667 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 RBM15Q96T37 977 aaKnown RBP eCLIP6.37□□□□□ -1.393e-8■□□□□ 8.9
TRIM4-205ENST00000496896 ZSWIM4Q9H7M6 989 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 BARX1Q9HBU1 254 aaPredicted RBP6.37□□□□□ -1.39
TRIM4-205ENST00000496896 ZFP69BQ9UJL9 534 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 ADAM29Q9UKF5 820 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 INVSQ9Y283 1065 aa6.37□□□□□ -1.39
TRIM4-205ENST00000496896 B4E1Z4 1266 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 OVOL3O00110 214 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 B4GALT3O60512 393 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 C4BPAP04003 597 aaKnown RBP6.36□□□□□ -1.39
TRIM4-205ENST00000496896 DNM2P50570 870 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 NFATC3Q12968 1075 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 DPP8Q6V1X1 898 aaPredicted RBP6.36□□□□□ -1.39
TRIM4-205ENST00000496896 NPM2Q86SE8 214 aaKnown RBP6.36□□□□□ -1.39
TRIM4-205ENST00000496896 REXO1L1PQ8IX06 675 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 SYNPOQ8N3V7 929 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 AJUBAQ96IF1 538 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 RIC8BQ9NVN3 520 aa6.36□□□□□ -1.39
TRIM4-205ENST00000496896 IL18BPO95998 194 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 KCNA6P17658 529 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 KRT15P19012 456 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 AOAHP28039 575 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 ZXDAP98168 799 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 SQSTM1Q13501 440 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 TBC1D10BQ4KMP7 808 aaPredicted RBP6.35□□□□□ -1.39
TRIM4-205ENST00000496896 Q6ZUG5 572 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 CXXC5Q7LFL8 322 aaKnown RBP6.35□□□□□ -1.39
TRIM4-205ENST00000496896 OVCH1Q7RTY7 1134 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 NOSTRINQ8IVI9 506 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 KATNBL1Q9H079 304 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 TMEM260Q9NX78 707 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 NISCHQ9Y2I1 1504 aa6.35□□□□□ -1.39
TRIM4-205ENST00000496896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.34□□□□□ -1.39
TRIM4-205ENST00000496896 H0Y858 1186 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 K7ESM1 405 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 FGD2Q7Z6J4 655 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 TTC9BQ8N6N2 239 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 STPG3Q8N7X2 389 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 NUDT10Q8NFP7 164 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 SH3TC2Q8TF17 1288 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 NUDT11Q96G61 164 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 BTBD7Q9P203 1132 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 ARHGAP28Q9P2N2 729 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 COQ6Q9Y2Z9 468 aa6.34□□□□□ -1.39
TRIM4-205ENST00000496896 LAMTOR5O43504 91 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 CUTAO60888 179 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 RFPL3O75679 317 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 PTGS1P23219 599 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 SDHAP31040 664 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 EPHB4P54760 987 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 ARHGAP44Q17R89 818 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 TMEM177Q53S58 311 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 ABHD17CQ6PCB6 329 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 OTOP1Q7RTM1 612 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 KBTBD2Q8IY47 623 aa6.33□□□□□ -1.4
TRIM4-205ENST00000496896 CISD2Q8N5K1 135 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms