RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 FAM90A27PA6NNH2 459 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 GPR39O43194 453 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 EYA4O95677 639 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 C4BPAP04003 597 aaKnown RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 ZBTB48P10074 688 aaPredicted RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 SLC9A1P19634 815 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 MC3RP41968 323 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 RAP1GAPP47736 663 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 NCKAP1LP55160 1127 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 DDB1Q16531 1140 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 PAN2Q504Q3 1202 aaKnown RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 ZC3H18Q86VM9 953 aaKnown RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 SPATS2Q86XZ4 545 aaKnown RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 MIB1Q86YT6 1006 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 RPUSD2Q8IZ73 545 aaKnown RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 FAM26EQ8N5C1 309 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 EFHBQ8N7U6 833 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 WDR66Q8TBY9 1149 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 COG1Q8WTW3 980 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 ERCC4Q92889 916 aaPredicted RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 TOE1Q96GM8 510 aaKnown RBP3.89□□□□□ -1.79
NCK1-212ENST00000496489 MCOLN1Q9GZU1 580 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 DTLQ9NZJ0 730 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 FAN1Q9Y2M0 1017 aa3.89□□□□□ -1.79
NCK1-212ENST00000496489 ACOT7O00154 380 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 DVL2O14641 736 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 FOXP2O15409 715 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 ZEB2O60315 1214 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 C8BP07358 591 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 MMEP08473 750 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 CYP2C8P10632 490 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 FAHP16930 419 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 PTX3P26022 381 aaPredicted RBP3.88□□□□□ -1.79
NCK1-212ENST00000496489 GUCY2FP51841 1108 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 CDR1P51861 262 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 EPHB3P54753 998 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 RNF219Q5W0B1 726 aaPredicted RBP3.88□□□□□ -1.79
NCK1-212ENST00000496489 IQSEC1Q6DN90 963 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 ESRP1Q6NXG1 681 aaKnown RBP3.88□□□□□ -1.79
NCK1-212ENST00000496489 TEPPQ6URK8 271 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 CD300LDQ6UXZ3 194 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 SPOCD1Q6ZMY3 1216 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 PASD1Q8IV76 773 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 FBXO15Q8NCQ5 510 aaPredicted RBP3.88□□□□□ -1.79
NCK1-212ENST00000496489 HIPK4Q8NE63 616 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 DLG3Q92796 817 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 MTMR8Q96EF0 704 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 TOX2Q96NM4 488 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 ELF4Q99607 663 aaPredicted RBP3.88□□□□□ -1.79
NCK1-212ENST00000496489 SGPP1Q9BX95 441 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 CNTD2Q9H8S5 307 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 HOMER2Q9NSB8 354 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 ARHGAP28Q9P2N2 729 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 RBPJLQ9UBG7 517 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 MBD1Q9UIS9 605 aaPredicted RBP3.88□□□□□ -1.79
NCK1-212ENST00000496489 SPO11Q9Y5K1 396 aa3.88□□□□□ -1.79
NCK1-212ENST00000496489 TEX51A0A1B0GUA7 166 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 RASSF10A6NK89 507 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 TGM5O43548 720 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 PEX10O60683 326 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 SEMA7AO75326 666 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 KATNA1O75449 491 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 LRG1P02750 347 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 TMEM253P0C7T8 217 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 NCAM1P13591 858 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 HSP90B1P14625 803 aaKnown RBP3.87□□□□□ -1.79
NCK1-212ENST00000496489 PFKLP17858 780 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 FBLN1P23142 703 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 MC4RP32245 332 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 NKX3-2P78367 333 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 CACNB2Q08289 660 aaPredicted RBP3.87□□□□□ -1.79
NCK1-212ENST00000496489 TARBP2Q15633 366 aaKnown RBP3.87□□□□□ -1.79
NCK1-212ENST00000496489 CR1LQ2VPA4 569 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 CATSPEREQ5SY80 951 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 CD276Q5ZPR3 534 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 VASNQ6EMK4 673 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 CC2D1AQ6P1N0 951 aaPredicted RBP3.87□□□□□ -1.79
NCK1-212ENST00000496489 TMC5Q6UXY8 1006 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 NECAB2Q7Z6G3 386 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 LDHDQ86WU2 507 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 SMARCC2Q8TAQ2 1214 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 MZB1Q8WU39 189 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 SLC5A5Q92911 643 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 PPP1R16BQ96T49 567 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 RNF38Q9H0F5 515 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 MS4A5Q9H3V2 200 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 ACSS2Q9NR19 701 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 SLC5A4Q9NY91 659 aa3.87□□□□□ -1.79
NCK1-212ENST00000496489 DDX56Q9NY93 547 aaKnown RBP3.87□□□□□ -1.79
NCK1-212ENST00000496489 LCHNA4D1U4 455 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 ALG1L2C9J202 215 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 RAB11FIP3O75154 756 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 ULK1O75385 1050 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 CYP17A1P05093 508 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 ATF2P15336 505 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 CD40P25942 277 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 CFPP27918 469 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 AOAHP28039 575 aa3.86□□□□□ -1.79
NCK1-212ENST00000496489 SDHAP31040 664 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms