RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TRIM7Q9C029 511 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 ECT2Q9H8V3 914 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 TMEM59LQ9UK28 342 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 MYH13Q9UKX3 1938 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 IGF2BP3O00425 579 aaKnown RBP eCLIP9.89□□□□□ -0.83
HPS4-217ENST00000496385 ZNF213O14771 459 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 PRPF3O43395 683 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 IFNAR1P17181 557 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 CALB2P22676 271 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 PCK1P35558 622 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 PDE6CP51160 858 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 KCNJ2P63252 427 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 PTPN12Q05209 780 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 PARP6Q2NL67 630 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 CCDC152Q4G0S7 254 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 PABPC1LQ4VXU2 614 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 SGMS1Q86VZ5 419 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 IRF2BP1Q8IU81 584 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 OPTNQ96CV9 577 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 ERGIC2Q96RQ1 377 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 LUC7LQ9NQ29 371 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 BTBD18B2RXH4 712 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 ZNF263O14978 683 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 SART1O43290 800 aaKnown RBP9.88□□□□□ -0.83
HPS4-217ENST00000496385 ZBTB43O43298 467 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 YBX3P16989 372 aaKnown RBP eCLIP9.88□□□□□ -0.83
HPS4-217ENST00000496385 CDC25CP30307 473 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 CYP27A1Q02318 531 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 FAM114A1Q8IWE2 563 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 PPP1R14BQ96C90 147 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 PGM2Q96G03 612 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 GREM2Q9H772 168 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 MYH10P35580 1976 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 ATP5HO75947 161 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 SP100P23497 879 aaPredicted RBP9.88□□□□□ -0.83
HPS4-217ENST00000496385 ECHS1P30084 290 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 MMP13P45452 471 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 HLTFQ14527 1009 aaKnown RBP eCLIP9.88□□□□□ -0.83
HPS4-217ENST00000496385 GPR162Q16538 588 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 RABL6Q3YEC7 729 aaPredicted RBP9.88□□□□□ -0.83
HPS4-217ENST00000496385 LMBR1LQ6UX01 489 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 FGD4Q96M96 766 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 NEUROD6Q96NK8 337 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 KRT12Q99456 494 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 MMADHCQ9H3L0 296 aaPredicted RBP9.88□□□□□ -0.83
HPS4-217ENST00000496385 RNPEPL1Q9HAU8 725 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 AGPAT5Q9NUQ2 364 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 DNAAF2Q9NVR5 837 aaKnown RBP9.88□□□□□ -0.83
HPS4-217ENST00000496385 CIDEBQ9UHD4 219 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 AGAP1Q9UPQ3 857 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 PCDHB6Q9Y5E3 794 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 LAMB2P55268 1798 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 KIAA1551Q9HCM1 1747 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 MYH7BA7E2Y1 1941 aa9.88□□□□□ -0.83
HPS4-217ENST00000496385 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 TRIM75PA6NK02 468 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 MAFGO15525 162 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 SNX3O60493 162 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 PDE8AO60658 829 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 SUN1O94901 812 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 UBOX5O94941 541 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 OAS1P00973 400 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 FGAP02671 866 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 CHGBP05060 677 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 MMEP08473 750 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 LIFRP42702 1097 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 MAGEA1P43355 309 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 KIF11P52732 1056 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 CTSWP56202 376 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 TGFB2P61812 414 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 FAM133BQ5BKY9 247 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 SLC10A5Q5PT55 438 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.83
HPS4-217ENST00000496385 TRIM22Q8IYM9 498 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 SMYD4Q8IYR2 804 aaPredicted RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 SPICE1Q8N0Z3 855 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 ADSSL1Q8N142 457 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 KLHDC4Q8TBB5 520 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 ATXN2LQ8WWM7 1075 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 CELF1Q92879 486 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 RBM17Q96I25 401 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 ZNF594Q96JF6 807 aaPredicted RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 SYT15Q9BQS2 421 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 EDEM3Q9BZQ6 932 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 IQCGQ9H095 443 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 MLXIPQ9HAP2 919 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 PCMTD2Q9NV79 361 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 SCOCQ9UIL1 159 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.87□□□□□ -0.83
HPS4-217ENST00000496385 KIF13BQ9NQT8 1826 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 SPDYE5A6NIY4 337 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 RAD51CO43502 376 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 LMNAP02545 664 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 MYL1P05976 194 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 CCNB1P14635 433 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 CXCR5P32302 372 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 PPP1R2P41236 205 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 PEX5P50542 639 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 MRPS25P82663 173 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms