RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SEC63Q9UGP8 760 aaKnown RBP20.18■□□□□ 0.82
TMEM53-209ENST00000495630 TUBE1Q9UJT0 475 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 CDY2AQ9Y6F7 541 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 SQORQ9Y6N5 450 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 RRN3P2A6NIE6 340 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 MAFGO15525 162 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 ITGB5P18084 799 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 GNAQP50148 359 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 SMAD4Q13485 552 aaKnown RBP20.17■□□□□ 0.82
TMEM53-209ENST00000495630 IER5Q5VY09 327 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 TNPO1Q92973 898 aaKnown RBP20.17■□□□□ 0.82
TMEM53-209ENST00000495630 PPP2R3CQ969Q6 453 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 FTHL17Q9BXU8 183 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 IGFLR1Q9H665 355 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 PSTPIP2Q9H939 334 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 CD207Q9UJ71 328 aa20.17■□□□□ 0.82
TMEM53-209ENST00000495630 ANTXR2P58335 489 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 MRPS6P82932 125 aaKnown RBP20.16■□□□□ 0.82
TMEM53-209ENST00000495630 CAMK1Q14012 370 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 CLUL1Q15846 466 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 HFE2Q6ZVN8 426 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 RTN4RL1Q86UN2 441 aaPredicted RBP20.16■□□□□ 0.82
TMEM53-209ENST00000495630 RNF135Q8IUD6 432 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 CMTR2Q8IYT2 770 aaKnown RBP20.16■□□□□ 0.82
TMEM53-209ENST00000495630 CRIPAKQ8N1N5 446 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 TMTC2Q8N394 836 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 MTA3Q9BTC8 594 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 AGO3Q9H9G7 860 aaKnown RBP20.16■□□□□ 0.82
TMEM53-209ENST00000495630 ALG13Q9NP73 1137 aaKnown RBP20.16■□□□□ 0.82
TMEM53-209ENST00000495630 UBIAD1Q9Y5Z9 338 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 TAF6LQ9Y6J9 622 aa20.16■□□□□ 0.82
TMEM53-209ENST00000495630 STXBP3O00186 592 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 DDAH1O94760 285 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 EYA4O95677 639 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 CHMLP26374 656 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 MARK3P27448 753 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 GTF2F1P35269 517 aaKnown RBP eCLIP20.15■□□□□ 0.82
TMEM53-209ENST00000495630 TTC22Q5TAA0 569 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 ZNF654Q8IZM8 581 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 SPPL3Q8TCT6 385 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 MUTYHQ9UIF7 546 aa20.15■□□□□ 0.82
TMEM53-209ENST00000495630 RALGAPA2Q2PPJ7 1873 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 TBX10O75333 385 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 STAG3L1P0CL83 205 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 GSPT1P15170 499 aaKnown RBP20.14■□□□□ 0.81
TMEM53-209ENST00000495630 CD52P31358 61 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 MTMR1Q13613 665 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 FAM43BQ6ZT52 329 aaPredicted RBP20.14■□□□□ 0.81
TMEM53-209ENST00000495630 NPAS4Q8IUM7 802 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 MB21D2Q8IYB1 491 aaPredicted RBP20.14■□□□□ 0.81
TMEM53-209ENST00000495630 EDAQ92838 391 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 MSLNLQ96KJ4 702 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 LY9Q9HBG7 655 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 JADE2Q9NQC1 790 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 MRPL42Q9Y6G3 142 aaKnown RBP20.14■□□□□ 0.81
TMEM53-209ENST00000495630 TTC3P53804 2025 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 KAT6AQ92794 2004 aa20.14■□□□□ 0.81
TMEM53-209ENST00000495630 LINC01565O15544 149 aa20.13■□□□□ 0.81
TMEM53-209ENST00000495630 INSRRP14616 1297 aa20.13■□□□□ 0.81
TMEM53-209ENST00000495630 BMP8AQ7Z5Y6 402 aa20.13■□□□□ 0.81
TMEM53-209ENST00000495630 SRBD1Q8N5C6 995 aaKnown RBP20.13■□□□□ 0.81
TMEM53-209ENST00000495630 MAP4K1Q92918 833 aa20.13■□□□□ 0.81
TMEM53-209ENST00000495630 PCDHA2Q9Y5H9 948 aa20.13■□□□□ 0.81
TMEM53-209ENST00000495630 NLRC5Q86WI3 1866 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 M0QZ92 97 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 ITGB1P05556 798 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 DNAJB1P25685 340 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 NDUFV1P49821 464 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 IGBP1P78318 339 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 CASC1Q6TDU7 716 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 NME8Q8N427 588 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 EFHBQ8N7U6 833 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 KLHL23Q8NBE8 558 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 EXOC6Q8TAG9 804 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 LINC01599Q8WXQ3 324 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 AZI2Q9H6S1 392 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 PADI3Q9ULW8 664 aa20.12■□□□□ 0.81
TMEM53-209ENST00000495630 SPDYE3A6NKU9 549 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 PDE4AP27815 886 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 COASYQ13057 564 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 PLPPR4Q7Z2D5 763 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 POF1BQ8WVV4 589 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 PCYT2Q99447 389 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 CELF4Q9BZC1 486 aaKnown RBP20.11■□□□□ 0.81
TMEM53-209ENST00000495630 FAM49AQ9H0Q0 323 aaPredicted RBP20.11■□□□□ 0.81
TMEM53-209ENST00000495630 CLEC1BQ9P126 229 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 PCDHA6Q9UN73 950 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 PCDHA8Q9Y5H6 950 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 TRPV2Q9Y5S1 764 aa20.11■□□□□ 0.81
TMEM53-209ENST00000495630 SGSM2O43147 1006 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 PLEKHA8P1O95397 391 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 CALM1P0DP23 149 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 CALM2P0DP24 149 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 CALM3P0DP25 149 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 PKN1Q16512 942 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 SMRP1Q8NCR6 262 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 JPH1Q9HDC5 661 aaPredicted RBP20.1■□□□□ 0.81
TMEM53-209ENST00000495630 PKD2L1Q9P0L9 805 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms