RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CLEC4DQ8WXI8 215 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 CDHR1Q96JP9 859 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 PNMA5Q96PV4 448 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 TBC1D22BQ9NU19 505 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 MAGEC2Q9UBF1 373 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-214ENST00000495485 KIAA1024Q9UPX6 916 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 MCM3APO60318 1980 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 RPTORQ8N122 1335 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 SYNGAP1Q96PV0 1343 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 DNAJC25-GNG10A0A024R161 153 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 ASB14A6NK59 587 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 AP5Z1O43299 807 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 MSCO60682 206 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 DKC1O60832 514 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDAC3-214ENST00000495485 TPM1P09493 284 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 CCND2P30279 289 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 EPHA7Q15375 998 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 MAMDC4Q6UXC1 1216 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 NSMFQ6X4W1 530 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 CCDC150Q8NCX0 1101 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 NSUN6Q8TEA1 469 aaKnown RBP11.41□□□□□ -0.58
HDAC3-214ENST00000495485 NELFBQ8WX92 580 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 DDX12PQ92771 950 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 MTRQ99707 1265 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 TSG101Q99816 390 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 XPO4Q9C0E2 1151 aaKnown RBP11.41□□□□□ -0.58
HDAC3-214ENST00000495485 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
HDAC3-214ENST00000495485 CTNND2Q9UQB3 1225 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
HDAC3-214ENST00000495485 IGLV3-22A0A075B6J6 115 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 POTEB2H3BUK9 544 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 IPO5O00410 1097 aaKnown RBP11.4□□□□□ -0.58
HDAC3-214ENST00000495485 NFIBO00712 420 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 KLRC4O43908 158 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 SSBP05455 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC3-214ENST00000495485 PLA2G4BP0C869 781 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 IDEP14735 1019 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 CCNE1P24864 410 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 PRCPP42785 496 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 COL13A1Q5TAT6 717 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-214ENST00000495485 FOXR2Q6PJQ5 311 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 CCDC186Q7Z3E2 898 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 TNS4Q8IZW8 715 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 SYTL5Q8TDW5 730 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-214ENST00000495485 TBC1D5Q92609 795 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 LENG9Q96B70 501 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 NACC1Q96RE7 527 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 RMDN3Q96TC7 470 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 THAP9Q9H5L6 903 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 JADE2Q9NQC1 790 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 BLOC1S4Q9NUP1 217 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 CYP39A1Q9NYL5 469 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 KCND2Q9NZV8 630 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
HDAC3-214ENST00000495485 FRMPD4Q14CM0 1322 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-214ENST00000495485 PSMD10O75832 226 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 EYA4O95677 639 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 IGHA2P01877 340 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 ZNF18P17022 549 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 CYP2B6P20813 491 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 EEF1GP26641 437 aaKnown RBP11.39□□□□□ -0.59
HDAC3-214ENST00000495485 CASP1P29466 404 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 SFNP31947 248 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 CLCN1P35523 988 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 RPS6P62753 249 aaKnown RBP11.39□□□□□ -0.59
HDAC3-214ENST00000495485 SPIRE1Q08AE8 756 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 MTMR1Q13613 665 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 PGM5Q15124 567 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 GNPTABQ3T906 1256 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 MUM1L1Q5H9M0 696 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 STXBP4Q6ZWJ1 553 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 MIER3Q7Z3K6 550 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 TMC6Q7Z403 805 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 GPBP1Q86WP2 473 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 CATSPER3Q86XQ3 398 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 GUF1Q8N442 669 aaKnown RBP11.39□□□□□ -0.59
HDAC3-214ENST00000495485 SYT2Q8N9I0 419 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-214ENST00000495485 RDM1Q8NG50 284 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 GPRASP2Q96D09 838 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 MAML3Q96JK9 1138 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 ZNF333Q96JL9 665 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 IWS1Q96ST2 819 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 EIF2AK1Q9BQI3 630 aaKnown RBP11.39□□□□□ -0.59
HDAC3-214ENST00000495485 TINF2Q9BSI4 451 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 PXMP2Q9NR77 195 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 PANK4Q9NVE7 773 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 GABRQQ9UN88 632 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 UBIAD1Q9Y5Z9 338 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
HDAC3-214ENST00000495485 BRCA2P51587 3418 aa11.39□□□□□ -0.59
HDAC3-214ENST00000495485 MYMKA6NI61 221 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 CCP110O43303 1012 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms