RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CD4P01730 458 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 SMIM10L2AP0DMW4 78 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 SMIM10L2BP0DMW5 78 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 RAG1P15918 1043 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 TXKP42681 527 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 PPP2R5CQ13362 524 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 NCAPH2Q6IBW4 605 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 GDF6Q6KF10 455 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 FERMT3Q86UX7 667 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 CCDC60Q8IWA6 550 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 HAS1Q92839 578 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 RNPEPQ9H4A4 650 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 PDLIM7Q9NR12 457 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 GABBR1Q9UBS5 961 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 NRCAMQ92823 1304 aa13.61□□□□□ -0.23
CSNK1E-213ENST00000495232 IGKV6D-21A0A0A0MT36 114 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 WNT7AO00755 349 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 DKC1O60832 514 aaKnown RBP eCLIP13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 PPFIA1Q13136 1202 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 PDE4DIPQ5VU43 2346 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 TRMT1LQ7Z2T5 733 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 CCDC155Q8N6L0 562 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 KAT6AQ92794 2004 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 ATP6V0A1Q93050 837 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 MTMR9Q96QG7 549 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 PCYT2Q99447 389 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 ZSCAN16Q9H4T2 348 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 PCDHB6Q9Y5E3 794 aa13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 MYH9P35579 1960 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-213ENST00000495232 RRN3P2A6NIE6 340 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 LAD1O00515 517 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 KIAA0355O15063 1070 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 HBP1O60381 514 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 CYP2C9P11712 490 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 TOB1P50616 345 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 IGBP1P78318 339 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 PTGDRQ13258 359 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 BFSP2Q13515 415 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 NBR1Q14596 966 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 PLCB4Q15147 1175 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 GRIK4Q16099 956 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 SH3RF1Q7Z6J0 888 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 RETREG2Q8NC44 543 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 FAM167AQ96KS9 214 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 RAB34Q9BZG1 259 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 TMEM60Q9H2L4 133 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 HIPK3Q9H422 1215 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 NRBP2Q9NSY0 501 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 SETD4Q9NVD3 440 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 VAV3Q9UKW4 847 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 CEP131Q9UPN4 1083 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 MAFBQ9Y5Q3 323 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-213ENST00000495232 TRIM43BA6NCK2 446 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 TIMP1P01033 207 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 TECP42680 631 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 PTK7Q13308 1070 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 EPHA7Q15375 998 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 PRPF38BQ5VTL8 546 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 B3GNT9Q6UX72 402 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 BBXQ8WY36 941 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 TRIM43Q96BQ3 446 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 PPP1R12CQ9BZL4 782 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 TBX21Q9UL17 535 aa13.58□□□□□ -0.24
CSNK1E-213ENST00000495232 EML1O00423 815 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 TREHO43280 583 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 BMP15O95972 392 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 OATP04181 439 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 P4HBP07237 508 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 INSRRP14616 1297 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 QARSP47897 775 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 PSMC5P62195 406 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 ZNF200P98182 395 aaPredicted RBP13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 PRKCEQ02156 737 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 DTHD1Q6ZMT9 781 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 TMEM199Q8N511 208 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 CAGE1Q8TC20 777 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 BADQ92934 168 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 TUBE1Q9UJT0 475 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 IGSF9BQ9UPX0 1349 aa13.57□□□□□ -0.24
CSNK1E-213ENST00000495232 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 CYP2C18P33260 490 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 ANP32AP39687 249 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 RESTQ13127 1097 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 ZNF484Q5JVG2 852 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 FOXD4L5Q5VV16 416 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms