RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SLC9A7Q96T83 725 aa12.1□□□□□ -0.47
NELFE-213ENST00000494956 TM6SF1Q9BZW5 370 aa12.1□□□□□ -0.47
NELFE-213ENST00000494956 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
NELFE-213ENST00000494956 EYSQ5T1H1 3165 aa12.1□□□□□ -0.47
NELFE-213ENST00000494956 MAFGO15525 162 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 DHX15O43143 795 aaKnown RBP12.09□□□□□ -0.47
NELFE-213ENST00000494956 LGR5O75473 907 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 CHRNA1P02708 482 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 INSRRP14616 1297 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 IGFBP4P22692 258 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 SCRN1Q12765 414 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 PLCB4Q15147 1175 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 CCDC85BQ15834 202 aaPredicted RBP12.09□□□□□ -0.47
NELFE-213ENST00000494956 MARCH8Q5T0T0 291 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 ERICH6BQ5W0A0 696 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 KRT40Q6A162 431 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 TRMT1LQ7Z2T5 733 aaKnown RBP12.09□□□□□ -0.47
NELFE-213ENST00000494956 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.09□□□□□ -0.47
NELFE-213ENST00000494956 GJA10Q969M2 543 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 TPCN1Q9ULQ1 816 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 COL4A4P53420 1690 aaPredicted RBP12.09□□□□□ -0.47
NELFE-213ENST00000494956 NFASCO94856 1347 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 EMSYQ7Z589 1322 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
NELFE-213ENST00000494956 EVPLQ92817 2033 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 LARGE1O95461 756 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.48
NELFE-213ENST00000494956 CYP3A4P08684 503 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 NLRP5P59047 1200 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 TAP1Q03518 808 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 SSRP1Q08945 709 aaKnown RBP12.08□□□□□ -0.48
NELFE-213ENST00000494956 PRR16Q569H4 304 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 PHOSPHO2Q8TCD6 241 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 DNAJB3Q8WWF6 145 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 ZNF274Q96GC6 653 aaPredicted RBP12.08□□□□□ -0.48
NELFE-213ENST00000494956 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
NELFE-213ENST00000494956 FAM49AQ9H0Q0 323 aaPredicted RBP12.08□□□□□ -0.48
NELFE-213ENST00000494956 GLT8D2Q9H1C3 349 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 TUBE1Q9UJT0 475 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 TRPC6Q9Y210 931 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 MYH9P35579 1960 aaKnown RBP12.08□□□□□ -0.48
NELFE-213ENST00000494956 CDH23Q9H251 3354 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 CHD7Q9P2D1 2997 aa12.08□□□□□ -0.48
NELFE-213ENST00000494956 ABHD14A-ACY1A0A1B0GW23 586 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 DLL1O00548 723 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 CPLX1O14810 134 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 TLL1O43897 1013 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 ATG7O95352 703 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
NELFE-213ENST00000494956 GHRP10912 638 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 GNAT1P11488 350 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 GNA11P29992 359 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 STAT5BP51692 787 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 AK2P54819 239 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 TMEM62Q0P6H9 643 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 IKBKEQ14164 716 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 NPY5RQ15761 445 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 PLEKHG4Q58EX7 1191 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 NIPA1Q7RTP0 329 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 CCDC60Q8IWA6 550 aaPredicted RBP12.07□□□□□ -0.48
NELFE-213ENST00000494956 MICALL1Q8N3F8 863 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 CCDC148Q8NFR7 591 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 CCDC12Q8WUD4 166 aaPredicted RBP12.07□□□□□ -0.48
NELFE-213ENST00000494956 ARNTL2Q8WYA1 636 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 LENG9Q96B70 501 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 ZNF577Q9BSK1 485 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 AZI2Q9H6S1 392 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 KCNJ14Q9UNX9 436 aa12.07□□□□□ -0.48
NELFE-213ENST00000494956 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.06□□□□□ -0.48
NELFE-213ENST00000494956 MBLAC1A4D2B0 266 aaPredicted RBP12.06□□□□□ -0.48
NELFE-213ENST00000494956 IPO5O00410 1097 aaKnown RBP12.06□□□□□ -0.48
NELFE-213ENST00000494956 BACH1O14867 736 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 DEXIO95424 95 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 CTDNEP1O95476 244 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 ATP4AP20648 1035 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 MGAT3Q09327 533 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 FAM26DQ5JW98 314 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 SWSAP1Q6NVH7 229 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 TRIM22Q8IYM9 498 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 MYOCDQ8IZQ8 938 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 NECAB1Q8N987 351 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 MTUS1Q9ULD2 1270 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 CDY2AQ9Y6F7 541 aa12.06□□□□□ -0.48
NELFE-213ENST00000494956 PRUNE2Q8WUY3 3088 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 IGKV6D-21A0A0A0MT36 114 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 M0R2N6 131 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 MSH4O15457 936 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 UPP2O95045 317 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 GJB5O95377 273 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 TDP2O95551 362 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 CIITAP33076 1130 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms