RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 CD244Q9BZW8 370 aa6.7□□□□□ -1.34
CCDC66-222ENST00000494672 TCRBV5S4A2TA0A5A2 114 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 GPR42O15529 346 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 GTF2F1P35269 517 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC66-222ENST00000494672 GABREP78334 506 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 DBPQ10586 325 aaPredicted RBP6.69□□□□□ -1.34
CCDC66-222ENST00000494672 FOXB2Q5VYV0 432 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 OSTM1Q86WC4 334 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 CDK5RAP1Q96SZ6 601 aaKnown RBP6.69□□□□□ -1.34
CCDC66-222ENST00000494672 DHRS4Q9BTZ2 278 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 DEF6Q9H4E7 631 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 SEC61A2Q9H9S3 476 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 RIC8BQ9NVN3 520 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 SRPK3Q9UPE1 567 aa6.69□□□□□ -1.34
CCDC66-222ENST00000494672 DIAPH1O60610 1272 aaKnown RBP6.68□□□□□ -1.34
CCDC66-222ENST00000494672 CENPBP07199 599 aaPredicted RBP6.68□□□□□ -1.34
CCDC66-222ENST00000494672 FAM153BP0C7A2 387 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 ICAM4Q14773 271 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 CRY1Q16526 586 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 FAM47CQ5HY64 1035 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 ZC3H12BQ5HYM0 836 aaKnown RBP6.68□□□□□ -1.34
CCDC66-222ENST00000494672 REXO1L1PQ8IX06 675 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 PCDH19Q8TAB3 1148 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 TACO1Q9BSH4 297 aaKnown RBP6.68□□□□□ -1.34
CCDC66-222ENST00000494672 SLC39A2Q9NP94 309 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 ATP23Q9Y6H3 246 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 KDM2BQ8NHM5 1336 aa6.68□□□□□ -1.34
CCDC66-222ENST00000494672 FAM90A27PA6NNH2 459 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 IL18BPO95998 194 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 C6orf222P0C671 652 aaPredicted RBP6.67□□□□□ -1.34
CCDC66-222ENST00000494672 SRGAP2CP0DJJ0 459 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 PYGMP11217 842 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 PDE6AP16499 860 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 PTPN1P18031 435 aaKnown RBP6.67□□□□□ -1.34
CCDC66-222ENST00000494672 GJA4P35212 333 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 LRP10Q7Z4F1 713 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 IFNL2Q8IZJ0 200 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 DNERQ8NFT8 737 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 PTPN18Q99952 460 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 KLC2Q9H0B6 622 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 ARHGAP28Q9P2N2 729 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 TSC22D4Q9Y3Q8 395 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 PCDHA9Q9Y5H5 950 aa6.67□□□□□ -1.34
CCDC66-222ENST00000494672 ARVCFO00192 962 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 ZNF623O75123 536 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 KRT15P19012 456 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 TNFRSF1AP19438 455 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 CSF2RBP32927 897 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 USP10Q14694 798 aaKnown RBP6.66□□□□□ -1.34
CCDC66-222ENST00000494672 PTRH1Q86Y79 214 aaKnown RBP6.66□□□□□ -1.34
CCDC66-222ENST00000494672 ZC3H7AQ8IWR0 971 aaKnown RBP6.66□□□□□ -1.34
CCDC66-222ENST00000494672 ARMC5Q96C12 935 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 EXOC2Q96KP1 924 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 C8orf37Q96NL8 207 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 CARD11Q9BXL7 1154 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 KATNBL1Q9H079 304 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 CD248Q9HCU0 757 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 SLC4A7Q9Y6M7 1214 aa6.66□□□□□ -1.34
CCDC66-222ENST00000494672 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.34
CCDC66-222ENST00000494672 PATE3B3GLJ2 98 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 MATN3O15232 486 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 CUTAO60888 179 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 CNOT4O95628 575 aaKnown RBP6.65□□□□□ -1.34
CCDC66-222ENST00000494672 CRTAMO95727 393 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 AMY2AP04746 511 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 AMY2BP19961 511 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 POLD1P28340 1107 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 ZXDAP98168 799 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 RBL2Q08999 1139 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 ZNF568Q3ZCX4 644 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 FIGNQ5HY92 759 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 LMF1Q96S06 567 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 SEMA4AQ9H3S1 761 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 CBLCQ9ULV8 474 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 CDK11AQ9UQ88 783 aaPredicted RBP6.65□□□□□ -1.34
CCDC66-222ENST00000494672 MRPS23Q9Y3D9 190 aaKnown RBP6.65□□□□□ -1.34
CCDC66-222ENST00000494672 TCAF1Q9Y4C2 921 aa6.65□□□□□ -1.34
CCDC66-222ENST00000494672 EFCAB14O75071 495 aa6.64□□□□□ -1.35
CCDC66-222ENST00000494672 DNM2P50570 870 aa6.64□□□□□ -1.35
CCDC66-222ENST00000494672 JAM2P57087 298 aa6.64□□□□□ -1.35
CCDC66-222ENST00000494672 SOGA3Q5TF21 947 aa6.64□□□□□ -1.35
CCDC66-222ENST00000494672 GPR155Q7Z3F1 870 aa6.64□□□□□ -1.35
CCDC66-222ENST00000494672 SH3RF3Q8TEJ3 882 aaPredicted RBP6.64□□□□□ -1.35
CCDC66-222ENST00000494672 PKNOX2Q96KN3 472 aa6.64□□□□□ -1.35
CCDC66-222ENST00000494672 MEGF9Q9H1U4 602 aa6.64□□□□□ -1.35
CCDC66-222ENST00000494672 LOC105371045A0A1W2PR82 267 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 ESYT3A0FGR9 886 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 CCDC66A2RUB6 948 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 LACTBP83111 547 aaPredicted RBP6.63□□□□□ -1.35
CCDC66-222ENST00000494672 SERINC3Q13530 473 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 WDR72Q3MJ13 1102 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 HS1BP3Q53T59 392 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 ZNF585AQ6P3V2 769 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 MAGEB10Q96LZ2 347 aaPredicted RBP6.63□□□□□ -1.35
CCDC66-222ENST00000494672 DEPDC7Q96QD5 511 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 LRRC37BQ96QE4 947 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 GALNT8Q9NY28 637 aa6.63□□□□□ -1.35
CCDC66-222ENST00000494672 ZNF561-AS1K7EIQ3 104 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 CLASP2O75122 1294 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms