RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ANO2Q9NQ90 1003 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 PCDHA6Q9UN73 950 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 PCDHA8Q9Y5H6 950 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 UBIAD1Q9Y5Z9 338 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 SLC12A7Q9Y666 1083 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 CDY2AQ9Y6F7 541 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 MYH9P35579 1960 aaKnown RBP14.49□□□□□ -0.09
SKA1-205ENST00000494518 H3BNC9 293 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 IBSPP21815 317 aaPredicted RBP14.49□□□□□ -0.09
SKA1-205ENST00000494518 SMARCA1P28370 1054 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 SSTR3P32745 418 aaPredicted RBP14.49□□□□□ -0.09
SKA1-205ENST00000494518 PLA2G5P39877 138 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 TMEM62Q0P6H9 643 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 TIGD5Q53EQ6 642 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 TMEM31Q5JXX7 168 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 FIBCD1Q8N539 461 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 FAM122AQ96E09 287 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 IL17RAQ96F46 866 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 C11orf16Q9NQ32 467 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
SKA1-205ENST00000494518 CNTNAP5Q8WYK1 1306 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 CALM1P0DP23 149 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 CALM2P0DP24 149 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 CALM3P0DP25 149 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 MARCH8Q5T0T0 291 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 WWC2Q6AWC2 1192 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 TAF2Q6P1X5 1199 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 FAM178BQ8IXR5 827 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 TMTC2Q8N394 836 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 CYP2W1Q8TAV3 490 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 TRAPPC12Q8WVT3 735 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 CDHR1Q96JP9 859 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 PCYT2Q99447 389 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 SMARCAD1Q9H4L7 1026 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 EHMT1Q9H9B1 1298 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 JADE2Q9NQC1 790 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 TRPC6Q9Y210 931 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 WDR81Q562E7 1941 aa14.48□□□□□ -0.09
SKA1-205ENST00000494518 ADGRA3Q8IWK6 1321 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 PLXNA4Q9HCM2 1894 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 GRM6O15303 877 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 INSRRP14616 1297 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 CD52P31358 61 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 LIFRP42702 1097 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 NAPAP54920 295 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 MRPS6P82932 125 aaKnown RBP14.47□□□□□ -0.09
SKA1-205ENST00000494518 NECTIN1Q15223 517 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 CLUL1Q15846 466 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 FBXO47Q5MNV8 452 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 RSPH3Q86UC2 560 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 GJD3Q8N144 294 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 LINC01599Q8WXQ3 324 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 UIMC1Q96RL1 719 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 MTA3Q9BTC8 594 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 NSUN3Q9H649 340 aaKnown RBP14.47□□□□□ -0.09
SKA1-205ENST00000494518 AGO3Q9H9G7 860 aaKnown RBP14.47□□□□□ -0.09
SKA1-205ENST00000494518 JPH1Q9HDC5 661 aaPredicted RBP14.47□□□□□ -0.09
SKA1-205ENST00000494518 CLDND1Q9NY35 253 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 SLC9A2Q9UBY0 812 aa14.47□□□□□ -0.09
SKA1-205ENST00000494518 MBLAC1A4D2B0 266 aaPredicted RBP14.46□□□□□ -0.09
SKA1-205ENST00000494518 GRXCR2A6NFK2 248 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 DDX39AO00148 427 aaKnown RBP14.46□□□□□ -0.09
SKA1-205ENST00000494518 ENPP3O14638 875 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 LINC00271P0C7V0 271 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 ARP10275 920 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 BTG3Q14201 252 aaPredicted RBP14.46□□□□□ -0.09
SKA1-205ENST00000494518 TSHZ1Q6ZSZ6 1077 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 RPAINQ86UA6 219 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 NEK9Q8TD19 979 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 PABPC5Q96DU9 382 aaKnown RBP14.46□□□□□ -0.09
SKA1-205ENST00000494518 MXRA8Q9BRK3 442 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 KCNH7Q9NS40 1196 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 TMEM260Q9NX78 707 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 HCN4Q9Y3Q4 1203 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 TRIOO75962 3097 aa14.46□□□□□ -0.09
SKA1-205ENST00000494518 FNDC1Q4ZHG4 1894 aaPredicted RBP14.46□□□□□ -0.1
SKA1-205ENST00000494518 PI4K2BG5E9Z4 385 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 GTF2F1P35269 517 aaKnown RBP eCLIP14.45□□□□□ -0.1
SKA1-205ENST00000494518 BMPR1AP36894 532 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 ACTR2P61160 394 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 ITGB3BPQ13352 177 aaPredicted RBP14.45□□□□□ -0.1
SKA1-205ENST00000494518 PLCB4Q15147 1175 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 PAN2Q504Q3 1202 aaKnown RBP14.45□□□□□ -0.1
SKA1-205ENST00000494518 APOA5Q6Q788 366 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 SYNE3Q6ZMZ3 975 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 SGMS1Q86VZ5 419 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 SDF4Q9BRK5 362 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 ANO3Q9BYT9 981 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 IGFLR1Q9H665 355 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
SKA1-205ENST00000494518 RC3H2Q9HBD1 1191 aaKnown RBP14.45□□□□□ -0.1
SKA1-205ENST00000494518 ALG13Q9NP73 1137 aaKnown RBP14.45□□□□□ -0.1
SKA1-205ENST00000494518 GPR37L1O60883 481 aa14.44□□□□□ -0.1
SKA1-205ENST00000494518 GATMP50440 423 aa14.44□□□□□ -0.1
SKA1-205ENST00000494518 DLX2Q07687 328 aaPredicted RBP14.44□□□□□ -0.1
SKA1-205ENST00000494518 RTN1Q16799 776 aa14.44□□□□□ -0.1
SKA1-205ENST00000494518 TMEM266Q2M3C6 531 aa14.44□□□□□ -0.1
SKA1-205ENST00000494518 C11orf84Q9BUA3 381 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms