RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 EIF3JO75822 258 aaKnown RBP12.88□□□□□ -0.35
TRIM59-206ENST00000494486 PLCB3Q01970 1234 aa12.88□□□□□ -0.35
TRIM59-206ENST00000494486 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
TRIM59-206ENST00000494486 RARS2Q5T160 578 aaKnown RBP12.88□□□□□ -0.35
TRIM59-206ENST00000494486 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
TRIM59-206ENST00000494486 RTN4RL1Q86UN2 441 aaPredicted RBP12.88□□□□□ -0.35
TRIM59-206ENST00000494486 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
TRIM59-206ENST00000494486 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
TRIM59-206ENST00000494486 SETD4Q9NVD3 440 aa12.88□□□□□ -0.35
TRIM59-206ENST00000494486 SETXQ7Z333 2677 aaKnown RBP12.88□□□□□ -0.35
TRIM59-206ENST00000494486 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
TRIM59-206ENST00000494486 POTEMA6NI47 508 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 LAMTOR5O43504 91 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
TRIM59-206ENST00000494486 LILRB5O75023 590 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 KCNA4P22459 653 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 SLC16A2P36021 539 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 FBXO47Q5MNV8 452 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
TRIM59-206ENST00000494486 KCNV1Q6PIU1 500 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 TSHZ1Q6ZSZ6 1077 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 LINC01599Q8WXQ3 324 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 ZSCAN32Q9NX65 697 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 LRFN2Q9ULH4 789 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 CA14Q9ULX7 337 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.87□□□□□ -0.35
TRIM59-206ENST00000494486 TTC3P53804 2025 aa12.87□□□□□ -0.35
TRIM59-206ENST00000494486 MYH4Q9Y623 1939 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 LRP3O75074 770 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 ADAM17P78536 824 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 TFAP4Q01664 338 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 MGAT3Q09327 533 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 UNQ6494/PRO21346Q6UXR6 183 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 TMC7Q7Z402 723 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 COLGALT1Q8NBJ5 622 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 TAAR1Q96RJ0 339 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
TRIM59-206ENST00000494486 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 GSG1L2A8MUP6 293 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 ZIC2O95409 532 aaPredicted RBP12.85□□□□□ -0.35
TRIM59-206ENST00000494486 SCG2P13521 617 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 GATMP50440 423 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
TRIM59-206ENST00000494486 RING1Q06587 406 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 SPEM2Q0P670 501 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 TTBK2Q6IQ55 1244 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 CCDC149Q6ZUS6 474 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 ERC1Q8IUD2 1116 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 C12orf76Q8N812 135 aaPredicted RBP12.85□□□□□ -0.35
TRIM59-206ENST00000494486 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
TRIM59-206ENST00000494486 PJA1Q8NG27 643 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 STRBPQ96SI9 672 aaKnown RBP12.85□□□□□ -0.35
TRIM59-206ENST00000494486 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 PUS7LQ9H0K6 701 aaKnown RBP12.85□□□□□ -0.35
TRIM59-206ENST00000494486 PAG1Q9NWQ8 432 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 STX8Q9UNK0 236 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 FRYLO94915 3013 aa12.85□□□□□ -0.35
TRIM59-206ENST00000494486 C1QTNF9BB2RNN3 333 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 TAF4O00268 1085 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
TRIM59-206ENST00000494486 GGPS1O95749 300 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 LGALS2P05162 132 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 C1QTNF9P0C862 333 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 SRFP11831 508 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 GLULP15104 373 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 LAG3P18627 525 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 KRT17Q04695 432 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 FAM43BQ6ZT52 329 aaPredicted RBP12.84□□□□□ -0.35
TRIM59-206ENST00000494486 NELL1Q92832 810 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 NXPE3Q969Y0 559 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 AGO3Q9H9G7 860 aaKnown RBP12.84□□□□□ -0.35
TRIM59-206ENST00000494486 SPATA6Q9NWH7 488 aaPredicted RBP12.84□□□□□ -0.35
TRIM59-206ENST00000494486 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
TRIM59-206ENST00000494486 TBKBP1A7MCY6 615 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 FOXD2O60548 495 aaPredicted RBP12.83□□□□□ -0.36
TRIM59-206ENST00000494486 NR3C2P08235 984 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
TRIM59-206ENST00000494486 TGFB3P10600 412 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 CD52P31358 61 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 SMC1AQ14683 1233 aaKnown RBP12.83□□□□□ -0.36
TRIM59-206ENST00000494486 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 IL31Q6EBC2 164 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 SLC44A3Q8N4M1 653 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 SYTL5Q8TDW5 730 aaPredicted RBP12.83□□□□□ -0.36
TRIM59-206ENST00000494486 BCO2Q9BYV7 579 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 MLXIPQ9HAP2 919 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms