RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	DRC7	Q8IY82	874 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	REPS2	Q8NFH8	660 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	SREK1	Q8WXA9	508 aa	Known RBP	12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	CCDC114	Q96M63	670 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	IWS1	Q96ST2	819 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	TEX13B	Q9BXU2	312 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	HOMER2	Q9NSB8	354 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	MAD2L2	Q9UI95	211 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	ADAMTS5	Q9UNA0	930 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	SCIN	Q9Y6U3	715 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	IVNS1ABP	Q9Y6Y0	642 aa		12.82	□□□□□ -0.36
BRCA1-222	ENST00000493919	TAL1	P17542	331 aa	Predicted RBP	12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	APOBR	Q0VD83	1088 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	APOA5	Q6Q788	366 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	SGMS1	Q86VZ5	419 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	RNF168	Q8IYW5	571 aa	Predicted RBP	12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	ANKK1	Q8NFD2	765 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	VMP1	Q96GC9	406 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	ZSWIM6	Q9HCJ5	1215 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	VAT1L	Q9HCJ6	419 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	FAN1	Q9Y2M0	1017 aa		12.81	□□□□□ -0.36
BRCA1-222	ENST00000493919	GOLGA8B	A8MQT2	603 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	KLRF2	D3W0D1	207 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	CHUK	O15111	745 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	ZNF189	O75820	626 aa	Predicted RBP	12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	FES	P07332	822 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	HDAC4	P56524	1084 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	TRIM29	Q14134	588 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	LRRC23	Q53EV4	343 aa	Predicted RBP	12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	BTNL9	Q6UXG8	535 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	PLEKHH3	Q7Z736	793 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	HOMER1	Q86YM7	354 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	RUFY1	Q96T51	708 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	TM6SF1	Q9BZW5	370 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	UBAP1	Q9NZ09	502 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	LRRC10B	A6NIK2	292 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	FAM25E	A8MYX2	175 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	ZBTB43	O43298	467 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	ATP6V1G1	O75348	118 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	KIAA0754	O94854	1291 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	FDX1	P10109	184 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	TCF3	P15923	654 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	KIF5B	P33176	963 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	PSMD7	P51665	324 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	SCRN1	Q12765	414 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	CNGA3	Q16281	694 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	COBLL1	Q53SF7	1204 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	RIOX2	Q8IUF8	465 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	ADGRF4	Q8IZF3	695 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	BICD2	Q8TD16	824 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	CEP63	Q96MT8	703 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	MCOLN1	Q9GZU1	580 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	BRD8	Q9H0E9	1235 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	GABBR1	Q9UBS5	961 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	SRRD	Q9UH36	339 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	CCPG1	Q9ULG6	757 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	G3BP2	Q9UN86	482 aa	Known RBP	12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	GABRQ	Q9UN88	632 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	MRFAP1	Q9Y605	127 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	PTCH2	Q9Y6C5	1203 aa		12.8	□□□□□ -0.36
BRCA1-222	ENST00000493919	MYH6	P13533	1939 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	DOCK3	Q8IZD9	2030 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	PALM3	A6NDB9	673 aa	Predicted RBP	12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	GOLGA8A	A7E2F4	631 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	EIF3F	O00303	357 aa	Predicted RBP	12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	SLC25A27	O95847	323 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	GNRH1	P01148	92 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	CALM1	P0DP23	149 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	CALM2	P0DP24	149 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	CALM3	P0DP25	149 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	ALAS1	P13196	640 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	CA8	P35219	290 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	DDIT3	P35638	169 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	FLT3LG	P49771	235 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	USH1G	Q495M9	461 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	WLS	Q5T9L3	541 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	CPLX2	Q6PUV4	134 aa	Known RBP	12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	SLC43A3	Q8NBI5	491 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	SHCBP1	Q8NEM2	672 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	RAET1E	Q8TD07	263 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	SMARCE1	Q969G3	411 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	ZBTB10	Q96DT7	871 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	OSBPL9	Q96SU4	736 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	NRDE2	Q9H7Z3	1164 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	LUC7L	Q9NQ29	371 aa	Known RBP	12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	PDRG1	Q9NUG6	133 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	RIPK3	Q9Y572	518 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	ZNF536	O15090	1300 aa		12.79	□□□□□ -0.36
BRCA1-222	ENST00000493919	PLEKHA8P1	O95397	391 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	OAZ1	P54368	228 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	TSR1	Q2NL82	804 aa	Known RBP	12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	OLFML1	Q6UWY5	402 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	CMTR1	Q8N1G2	835 aa	Known RBP	12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	CCDC150	Q8NCX0	1101 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	SOCS4	Q8WXH5	440 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	CENPT	Q96BT3	561 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	GSDMA	Q96QA5	445 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	NUDT12	Q9BQG2	462 aa		12.78	□□□□□ -0.36
BRCA1-222	ENST00000493919	UBXN6	Q9BZV1	441 aa		12.78	□□□□□ -0.36

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