RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MOXD1Q6UVY6 613 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 FTOQ9C0B1 505 aaKnown RBP eCLIP25.66■■□□□ 1.7
SNIP1-203ENST00000493916 TRIP12Q14669 1992 aaPredicted RBP25.65■■□□□ 1.7
SNIP1-203ENST00000493916 MBLAC1A4D2B0 266 aaPredicted RBP25.65■■□□□ 1.7
SNIP1-203ENST00000493916 NBNO60934 754 aa25.65■■□□□ 1.7
SNIP1-203ENST00000493916 SMAP1Q8IYB5 467 aaPredicted RBP25.65■■□□□ 1.7
SNIP1-203ENST00000493916 TNPO1Q92973 898 aaKnown RBP25.65■■□□□ 1.7
SNIP1-203ENST00000493916 MBOAT7Q96N66 472 aa25.65■■□□□ 1.7
SNIP1-203ENST00000493916 GJB4Q9NTQ9 266 aa25.65■■□□□ 1.7
SNIP1-203ENST00000493916 MTMR10Q9NXD2 777 aa25.65■■□□□ 1.7
SNIP1-203ENST00000493916 SLC4A7Q9Y6M7 1214 aa25.65■■□□□ 1.7
SNIP1-203ENST00000493916 MSH4O15457 936 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 BAIAP3O94812 1187 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 DNAJB2P25686 324 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 PLCB4Q15147 1175 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 FAM160B1Q5W0V3 765 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 MIS18BP1Q6P0N0 1132 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 TAF2Q6P1X5 1199 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 TCEAL9Q9UHQ7 104 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 TUBE1Q9UJT0 475 aa25.64■■□□□ 1.7
SNIP1-203ENST00000493916 CCDC194A0A1B0GVG4 234 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 RRN3P2A6NIE6 340 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 ZBBXA8MT70 800 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 RSPH10B2B2RC85 870 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 JAK2O60674 1132 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 RSPH10BP0C881 870 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 MBTPS1Q14703 1052 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 MARCH8Q5T0T0 291 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 RPAINQ86UA6 219 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 CCDC60Q8IWA6 550 aaPredicted RBP25.63■■□□□ 1.69
SNIP1-203ENST00000493916 SLC5A5Q92911 643 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 ZSCAN31Q96LW9 406 aaPredicted RBP25.63■■□□□ 1.69
SNIP1-203ENST00000493916 UIMC1Q96RL1 719 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 RIT2Q99578 217 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 TRPC6Q9Y210 931 aa25.63■■□□□ 1.69
SNIP1-203ENST00000493916 BACH1O14867 736 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 TDP2O95551 362 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 INSRRP14616 1297 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 RABEP1Q15276 862 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 INF2Q27J81 1249 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 CNKSR3Q6P9H4 555 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 OXER1Q8TDS5 423 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 PBX4Q9BYU1 374 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 UPF2Q9HAU5 1272 aaKnown RBP25.62■■□□□ 1.69
SNIP1-203ENST00000493916 ZNF302Q9NR11 478 aa25.62■■□□□ 1.69
SNIP1-203ENST00000493916 POTEB3A0JP26 581 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 GRXCR1A8MXD5 290 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 KRT2P35908 639 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 POTEBQ6S5H4 581 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 RUFY4Q6ZNE9 571 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 IL27Q8NEV9 243 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 LLPHQ9BRT6 129 aaKnown RBP25.61■■□□□ 1.69
SNIP1-203ENST00000493916 TTYH1Q9H313 450 aaPredicted RBP25.61■■□□□ 1.69
SNIP1-203ENST00000493916 BRMS1Q9HCU9 246 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 SH2B1Q9NRF2 756 aaPredicted RBP25.61■■□□□ 1.69
SNIP1-203ENST00000493916 PCDHA10Q9Y5I2 948 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 CHD9Q3L8U1 2897 aa25.61■■□□□ 1.69
SNIP1-203ENST00000493916 WDR64B1ANS9 1081 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 GAS7O60861 476 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 RPLP2P05387 115 aaKnown RBP25.6■■□□□ 1.69
SNIP1-203ENST00000493916 PSAPP07602 524 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 ATP2A2P16615 1042 aaKnown RBP25.6■■□□□ 1.69
SNIP1-203ENST00000493916 RAB30Q15771 203 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 FAM26DQ5JW98 314 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 NEK8Q86SG6 692 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 ETNPPLQ8TBG4 499 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 ATP8B4Q8TF62 1192 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 TNFRSF25Q93038 417 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 TIFAQ96CG3 184 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 SLC9A7Q96T83 725 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 SEMA6BQ9H3T3 888 aa25.6■■□□□ 1.69
SNIP1-203ENST00000493916 MAFBQ9Y5Q3 323 aaPredicted RBP25.6■■□□□ 1.69
SNIP1-203ENST00000493916 GCFC2P16383 781 aaKnown RBP25.59■■□□□ 1.69
SNIP1-203ENST00000493916 PBX2P40425 430 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 LRCH2Q5VUJ6 765 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 PPP4R3AQ6IN85 833 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 SWSAP1Q6NVH7 229 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 PDXDC2PQ6P474 469 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 PIK3AP1Q6ZUJ8 805 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 CCDC83Q8IWF9 413 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 PHOSPHO2Q8TCD6 241 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 NAP1L4Q99733 375 aaKnown RBP25.59■■□□□ 1.69
SNIP1-203ENST00000493916 TEKT3Q9BXF9 490 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 DDX25Q9UHL0 483 aaKnown RBP25.59■■□□□ 1.69
SNIP1-203ENST00000493916 IGSF9BQ9UPX0 1349 aa25.59■■□□□ 1.69
SNIP1-203ENST00000493916 TET1Q8NFU7 2136 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 COL1A2P08123 1366 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 HBP1O60381 514 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 EFCAB14O75071 495 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 PSMD10O75832 226 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 MMP1P03956 469 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 CTSHP09668 335 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 SFNP31947 248 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 IGBP1P78318 339 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 TRIM29Q14134 588 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 LETM2Q2VYF4 491 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 RSPH3Q86UC2 560 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 GUCD1Q96NT3 240 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 MSRAQ9UJ68 235 aa25.58■■□□□ 1.69
SNIP1-203ENST00000493916 ABHD14A-ACY1A0A1B0GW23 586 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms