RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 IFNL3Q8IZI9 196 aa6.83□□□□□ -1.32
SMC4-223ENST00000493695 OR14A2Q96R54 314 aa6.83□□□□□ -1.32
SMC4-223ENST00000493695 RIC8BQ9NVN3 520 aa6.83□□□□□ -1.32
SMC4-223ENST00000493695 TELO2Q9Y4R8 837 aa6.83□□□□□ -1.32
SMC4-223ENST00000493695 IQCA1LA6NCM1 817 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 IL18BPO95998 194 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 DNAJA1P31689 397 aaKnown RBP6.82□□□□□ -1.32
SMC4-223ENST00000493695 NOLC1Q14978 699 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMC4-223ENST00000493695 WDR72Q3MJ13 1102 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 RNF207Q6ZRF8 634 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 FUKQ8N0W3 1084 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 EXTL1Q92935 676 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 IPPKQ9H8X2 491 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 NR2E1Q9Y466 385 aa6.82□□□□□ -1.32
SMC4-223ENST00000493695 ZNF202O95125 648 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
SMC4-223ENST00000493695 ACO1P21399 889 aaKnown RBP6.81□□□□□ -1.32
SMC4-223ENST00000493695 GPR85P60893 370 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 ARID5AQ03989 594 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 ABHD18Q0P651 414 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 BTBD8Q5XKL5 378 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 DPP8Q6V1X1 898 aaPredicted RBP6.81□□□□□ -1.32
SMC4-223ENST00000493695 ANKS3Q6ZW76 656 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 CELF2-AS1Q8N7Q2 184 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 DPYSL5Q9BPU6 564 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 KATNBL1Q9H079 304 aa6.81□□□□□ -1.32
SMC4-223ENST00000493695 ACOT7O00154 380 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 CR2P20023 1033 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 POLD1P28340 1107 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 LSM12Q3MHD2 195 aaKnown RBP6.8□□□□□ -1.32
SMC4-223ENST00000493695 ZMAT1Q5H9K5 638 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 AGBL4Q5VU57 503 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 C1orf210Q8IVY1 113 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 ZFYVE21Q9BQ24 234 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 OAZ3Q9UMX2 235 aa6.8□□□□□ -1.32
SMC4-223ENST00000493695 TRAV20A0A0B4J274 112 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 CAPNS1P04632 268 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 ADCY8P40145 1251 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 PTH1RQ03431 593 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 NTRK3Q16288 839 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 DDR2Q16832 855 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 DPH6Q7L8W6 267 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 MTDHQ86UE4 582 aaKnown RBP6.79□□□□□ -1.32
SMC4-223ENST00000493695 WDR48Q8TAF3 677 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMC4-223ENST00000493695 SGSM3Q96HU1 749 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 CATSPERZQ9NTU4 200 aa6.79□□□□□ -1.32
SMC4-223ENST00000493695 CUTAO60888 179 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 KRT15P19012 456 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 KCNQ1P51787 676 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 DGCR2P98153 550 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 DBPQ10586 325 aaPredicted RBP6.78□□□□□ -1.32
SMC4-223ENST00000493695 FAM89AQ96GI7 184 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 PLEKHG4BQ96PX9 1271 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 C11orf21Q9P2W6 132 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 TRAF6Q9Y4K3 522 aa6.78□□□□□ -1.32
SMC4-223ENST00000493695 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.77□□□□□ -1.33
SMC4-223ENST00000493695 RAD17O75943 681 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 HMGCRP04035 888 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 FGFR1P11362 822 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 MCM7P33993 719 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 EPHA5P54756 1037 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 MIIPQ5JXC2 388 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 YOD1Q5VVQ6 348 aaPredicted RBP6.77□□□□□ -1.33
SMC4-223ENST00000493695 STYK1Q6J9G0 422 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 POLNQ7Z5Q5 900 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 NLGN4XQ8N0W4 816 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 EDAQ92838 391 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 OSBP2Q969R2 916 aa6.77□□□□□ -1.33
SMC4-223ENST00000493695 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
SMC4-223ENST00000493695 FGRP09769 529 aa6.76□□□□□ -1.33
SMC4-223ENST00000493695 PTPN1P18031 435 aaKnown RBP6.76□□□□□ -1.33
SMC4-223ENST00000493695 ST5P78524 1137 aa6.76□□□□□ -1.33
SMC4-223ENST00000493695 TOP3AQ13472 1001 aaPredicted RBP6.76□□□□□ -1.33
SMC4-223ENST00000493695 ARHGAP36Q6ZRI8 547 aa6.76□□□□□ -1.33
SMC4-223ENST00000493695 OTOP2Q7RTS6 562 aa6.76□□□□□ -1.33
SMC4-223ENST00000493695 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
SMC4-223ENST00000493695 LRRC47Q8N1G4 583 aaKnown RBP6.76□□□□□ -1.33
SMC4-223ENST00000493695 ZNF503Q96F45 646 aa6.76□□□□□ -1.33
SMC4-223ENST00000493695 CDC42EP3Q9UKI2 254 aa6.76□□□□□ -1.33
SMC4-223ENST00000493695 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
SMC4-223ENST00000493695 PRAMEF25A6NGN4 478 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 PAK1Q13153 545 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 HABP4Q5JVS0 413 aaKnown RBP6.75□□□□□ -1.33
SMC4-223ENST00000493695 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 NEU4Q8WWR8 484 aaPredicted RBP6.75□□□□□ -1.33
SMC4-223ENST00000493695 SCYL1Q96KG9 808 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
SMC4-223ENST00000493695 CDC6Q99741 560 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 PLA2G12BQ9BX93 195 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 KIAA1683Q9H0B3 1180 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 FAM184BQ9ULE4 1060 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 ATP23Q9Y6H3 246 aa6.75□□□□□ -1.33
SMC4-223ENST00000493695 SRGAP2CP0DJJ0 459 aa6.74□□□□□ -1.33
SMC4-223ENST00000493695 HIBADHP31937 336 aaKnown RBP6.74□□□□□ -1.33
SMC4-223ENST00000493695 MEOX1P50221 254 aa6.74□□□□□ -1.33
SMC4-223ENST00000493695 HHEXQ03014 270 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms