RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LENG9Q96B70 501 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
CTSA-209ENST00000493522 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
CTSA-209ENST00000493522 SLC28A3Q9HAS3 691 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
CTSA-209ENST00000493522 NFASCO94856 1347 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
CTSA-209ENST00000493522 SLC37A4O43826 429 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 EDIL3O43854 480 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 KPNA6O60684 536 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 GCFC2P16383 781 aaKnown RBP13.11□□□□□ -0.31
CTSA-209ENST00000493522 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 IGFBP4P22692 258 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 CHMP4BP1P59074 171 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 PURAQ00577 322 aaKnown RBP13.11□□□□□ -0.31
CTSA-209ENST00000493522 OTOP2Q7RTS6 562 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 SPRYD3Q8NCJ5 442 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 MTG1Q9BT17 334 aaPredicted RBP13.11□□□□□ -0.31
CTSA-209ENST00000493522 CXXC1Q9P0U4 656 aaPredicted RBP13.11□□□□□ -0.31
CTSA-209ENST00000493522 SLC9A2Q9UBY0 812 aa13.11□□□□□ -0.31
CTSA-209ENST00000493522 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
CTSA-209ENST00000493522 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 CYP3A7-CYP3A51PA0A087WV96 503 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 MSH4O15457 936 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 B4GALT4O60513 344 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 CYP3A7P24462 503 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 CCL23P55773 120 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 PSMC6P62333 389 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 MRPS5P82675 430 aaKnown RBP13.1□□□□□ -0.31
CTSA-209ENST00000493522 BECN1Q14457 450 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 Q4G0T1 1027 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 UTP14CQ5TAP6 766 aaKnown RBP13.1□□□□□ -0.31
CTSA-209ENST00000493522 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
CTSA-209ENST00000493522 MBOAT7Q96N66 472 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 ASB2Q96Q27 587 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 GPR20Q99678 358 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
CTSA-209ENST00000493522 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 TELO2Q9Y4R8 837 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
CTSA-209ENST00000493522 MARCH6O60337 910 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 GAS7O60861 476 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 LGALS2P05162 132 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 HOXD8P13378 290 aaPredicted RBP13.09□□□□□ -0.31
CTSA-209ENST00000493522 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTSA-209ENST00000493522 TCF7P36402 384 aaPredicted RBP13.09□□□□□ -0.31
CTSA-209ENST00000493522 MYO9BQ13459 2157 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 ADGRE1Q14246 886 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
CTSA-209ENST00000493522 FAM47CQ5HY64 1035 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 LRCH2Q5VUJ6 765 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 PPP4R3AQ6IN85 833 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 ADAMTS19Q8TE59 1207 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 EVPLQ92817 2033 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 GJA10Q969M2 543 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 TEKT3Q9BXF9 490 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 TRPV6Q9H1D0 765 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 WNT8AQ9H1J5 351 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
CTSA-209ENST00000493522 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 SLC4A7Q9Y6M7 1214 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 REV3LO60673 3130 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
CTSA-209ENST00000493522 NCOR1O75376 2440 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 BDP1A6H8Y1 2624 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 ZBBXA8MT70 800 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 WNT7AO00755 349 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 CHMP2AO43633 222 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 NEMFO60524 1076 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 F2P00734 622 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 PFKMP08237 780 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 SUPT20HL2P0C7V6 817 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 SYT1P21579 422 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 MCM7P33993 719 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 PSEN2P49810 448 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 ACTR2P61160 394 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 KRT76Q01546 638 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 MFSD10Q14728 455 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 TTC38Q5R3I4 469 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 ETNPPLQ8TBG4 499 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 PPP1R13LQ8WUF5 828 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
CTSA-209ENST00000493522 KATNAL1Q9BW62 490 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.32
CTSA-209ENST00000493522 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
CTSA-209ENST00000493522 TRANK1O15050 2925 aa13.08□□□□□ -0.32
CTSA-209ENST00000493522 GSTTP1A0A1W2PQM5 241 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 DHX15O43143 795 aaKnown RBP13.07□□□□□ -0.32
CTSA-209ENST00000493522 CCNE2O96020 404 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 COL9A1P20849 921 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 NBR1Q14596 966 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 CALCRLQ16602 461 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 KIAA0753Q2KHM9 967 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms