RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 LONP1P36776 959 aaKnown RBP19.31■□□□□ 0.68
LIME1-208ENST00000493265 CPT1AP50416 773 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 GJA9P57773 515 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 PDIA5Q14554 519 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
LIME1-208ENST00000493265 GNASQ5JWF2 1037 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 SWSAP1Q6NVH7 229 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 TRMT1LQ7Z2T5 733 aaKnown RBP19.31■□□□□ 0.68
LIME1-208ENST00000493265 SMAP1Q8IYB5 467 aaPredicted RBP19.31■□□□□ 0.68
LIME1-208ENST00000493265 IGSF22Q8N9C0 903 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 BANK1Q8NDB2 785 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 ERMNQ8TAM6 284 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 DYDC2Q96IM9 177 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 GOLGA6L4A6NEF3 574 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 ADAMTS4O75173 837 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 SUPT20HL2P0C7V6 817 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 ZNF286BP0CG31 522 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 CCT6AP40227 531 aaKnown RBP19.3■□□□□ 0.68
LIME1-208ENST00000493265 CSPP1Q1MSJ5 1256 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 B3GNT9Q6UX72 402 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 ABHD15Q6UXT9 468 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 TRIM50Q86XT4 487 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 RASSF8Q8NHQ8 419 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 SNX29Q8TEQ0 813 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 GLG1Q92896 1179 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 EIF2AK1Q9BQI3 630 aaKnown RBP19.3■□□□□ 0.68
LIME1-208ENST00000493265 UPF3AQ9H1J1 476 aaKnown RBP19.3■□□□□ 0.68
LIME1-208ENST00000493265 RGL1Q9NZL6 768 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 GABBR1Q9UBS5 961 aa19.3■□□□□ 0.68
LIME1-208ENST00000493265 A6NJR5 290 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 DLL1O00548 723 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 CTAGE5O15320 804 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 UBA7P41226 1012 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 CTTNQ14247 550 aaKnown RBP19.29■□□□□ 0.68
LIME1-208ENST00000493265 EPHA7Q15375 998 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 DGKDQ16760 1214 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 AXDND1Q5T1B0 1012 aaPredicted RBP19.29■□□□□ 0.68
LIME1-208ENST00000493265 KRT79Q5XKE5 535 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 USP49Q70CQ1 688 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 Q7L0L9 218 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 RNF180Q86T96 592 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 CCDC60Q8IWA6 550 aaPredicted RBP19.29■□□□□ 0.68
LIME1-208ENST00000493265 TPH2Q8IWU9 490 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 EPSTI1Q96J88 318 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 PLIN2Q99541 437 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 AZI2Q9H6S1 392 aa19.29■□□□□ 0.68
LIME1-208ENST00000493265 MORC2Q9Y6X9 1032 aaPredicted RBP19.29■□□□□ 0.68
LIME1-208ENST00000493265 PRPF40AO75400 957 aaKnown RBP19.28■□□□□ 0.68
LIME1-208ENST00000493265 ATG7O95352 703 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 LGALS2P05162 132 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 MARK3P27448 753 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 LRRC41Q15345 812 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 KCNA10Q16322 511 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 UGCGQ16739 394 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 FAM160B1Q5W0V3 765 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 SHC4Q6S5L8 630 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 CABP7Q86V35 215 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 CKAP2LQ8IYA6 745 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 TDHQ8IZJ6 230 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 DEFB123Q8N688 67 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 SYMPKQ92797 1274 aaKnown RBP19.28■□□□□ 0.68
LIME1-208ENST00000493265 AK8Q96MA6 479 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
LIME1-208ENST00000493265 ZNF302Q9NR11 478 aa19.28■□□□□ 0.68
LIME1-208ENST00000493265 A0A087WWV3 80 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 ZEB2O60315 1214 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 PPFIA4O75335 1185 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 MED24O75448 989 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 COL6A1P12109 1028 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 LRRC26Q2I0M4 334 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 PDXDC2PQ6P474 469 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 ARRDC4Q8NCT1 418 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 RDM1Q8NG50 284 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 PPP1R13LQ8WUF5 828 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 CDK5RAP3Q96JB5 506 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 PCYT2Q99447 389 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 LXNQ9BS40 222 aa19.27■□□□□ 0.68
LIME1-208ENST00000493265 POTEB3A0JP26 581 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 KBTBD13C9JR72 458 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 GADD45BO75293 160 aaPredicted RBP19.26■□□□□ 0.67
LIME1-208ENST00000493265 P4HBP07237 508 aaKnown RBP19.26■□□□□ 0.67
LIME1-208ENST00000493265 TXLNAP40222 546 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 STAT5BP51692 787 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 HAUS3Q68CZ6 603 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 POTEBQ6S5H4 581 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 CXCL17Q6UXB2 119 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 CATSPER3Q86XQ3 398 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 KLHDC9Q8NEP7 349 aa19.26■□□□□ 0.67
LIME1-208ENST00000493265 MMTAG2Q9BU76 263 aaKnown RBP19.26■□□□□ 0.67
LIME1-208ENST00000493265 SLITRK3O94933 977 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 ASGR1P07306 291 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 SPATA31C1P0DKV0 1188 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 QARSP47897 775 aaKnown RBP19.25■□□□□ 0.67
LIME1-208ENST00000493265 KARSQ15046 597 aaKnown RBP19.25■□□□□ 0.67
LIME1-208ENST00000493265 ECM1Q16610 540 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms