RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 DCAF7P61962 342 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 BECN1Q14457 450 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 SPARCL1Q14515 664 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 IQCB1Q15051 598 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 SUPT20HL1Q3ZLR7 823 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 TMEM67Q5HYA8 995 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 MEX3CQ5U5Q3 659 aaKnown RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 PCNX4Q63HM2 1172 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 CAPRIN2Q6IMN6 1127 aaKnown RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 RAB12Q6IQ22 244 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC81Q6ZN84 652 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 KIAA1211Q6ZU35 1233 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 SYDE1Q6ZW31 735 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 CENPQQ7L2Z9 268 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 NLRP8Q86W28 1048 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 FCHSD1Q86WN1 690 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 TRIM50Q86XT4 487 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 PDCL2Q8N4E4 241 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 NBPF15Q8N660 670 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ATP11CQ8NB49 1132 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 PCYOX1LQ8NBM8 494 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ZSWIM2Q8NEG5 633 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 PLBD2Q8NHP8 589 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 LEO1Q8WVC0 666 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 THOC1Q96FV9 657 aaKnown RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC138Q96M89 665 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 PIGSQ96S52 555 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 HINFPQ9BQA5 517 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 OSBPL10Q9BXB5 764 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 GLT8D2Q9H1C3 349 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 C2orf40Q9H1Z8 148 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 TCF7L1Q9HCS4 588 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ATP13A1Q9HD20 1204 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 GPR108Q9NPR9 543 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 NSMCE4AQ9NXX6 385 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 PTBP2Q9UKA9 531 aaKnown RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 C19orf53Q9UNZ5 99 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ATP11BQ9Y2G3 1177 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 PTPN22Q9Y2R2 807 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 SPO11Q9Y5K1 396 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 DNAJC25-GNG10A0A024R161 153 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 UBAP1LF5GYI3 381 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 PI4K2BG5E9Z4 385 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 M0R2N6 131 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GRIN3BO60391 1043 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 TSC22D2O75157 780 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 PALMO75781 387 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 BAG4O95429 457 aaKnown RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 S100A6P06703 90 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 RPSAP08865 295 aaKnown RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 RHCEP18577 417 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ATP5F1P24539 256 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 PSMA4P25789 261 aaKnown RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 KRT9P35527 623 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 EPS15P42566 896 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 NR2C2P49116 596 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GSK3AP49840 483 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ETV1P50549 477 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 YARSP54577 528 aaKnown RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 RHDQ02161 417 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ZBTB16Q05516 673 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GTF2H3Q13889 308 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 PRKG1Q13976 671 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 KCNB1Q14721 858 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 TEAD4Q15561 434 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GEN1Q17RS7 908 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ABCB5Q2M3G0 1257 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 C15orf59Q2T9L4 293 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 PLA2G4EQ3MJ16 856 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 SMUG1Q53HV7 270 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ZNF697Q5TEC3 545 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC102BQ68D86 513 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 OTUD7BQ6GQQ9 843 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 SLC30A6Q6NXT4 461 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 CNNM4Q6P4Q7 775 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 SHQ1Q6PI26 577 aaKnown RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 TRAF7Q6Q0C0 670 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 TAOK1Q7L7X3 1001 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GALNT7Q86SF2 657 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ANKRD52Q8NB46 1076 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 TRIM58Q8NG06 486 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GOT1L1Q8NHS2 421 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 FBXO27Q8NI29 283 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 NOC3LQ8WTT2 800 aaKnown RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GIMAP5Q96F15 307 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 WDR24Q96S15 920 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 CSRNP1Q96S65 589 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 SLF1Q9BQI6 1058 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 DHRS4Q9BTZ2 278 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 CARD11Q9BXL7 1154 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 TXLNGYQ9BZA5 131 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 OSBPL7Q9BZF2 842 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 RABEP2Q9H5N1 569 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ACAD9Q9H845 621 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 CRLF2Q9HC73 371 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 SPON1Q9HCB6 807 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 HOMER3Q9NSC5 361 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 AATFQ9NY61 560 aaKnown RBP eCLIP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ADGRE2Q9UHX3 823 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms