RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ESYT3A0FGR9 886 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 BLACEA4D250 179 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 FAM47E-STBD1D6RA91 191 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 ACOT7O00154 380 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 SOD2P04179 222 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 ACO1P21399 889 aaKnown RBP6.6□□□□□ -1.35
PHC3-213ENST00000491258 POLD1P28340 1107 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 GPR85P60893 370 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 NOLC1Q14978 699 aaKnown RBP eCLIP6.6□□□□□ -1.35
PHC3-213ENST00000491258 NTRK3Q16288 839 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 RNF151Q2KHN1 245 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 HABP4Q5JVS0 413 aaKnown RBP6.6□□□□□ -1.35
PHC3-213ENST00000491258 IFNL3Q8IZI9 196 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 HNRNPLLQ8WVV9 542 aaKnown RBP6.6□□□□□ -1.35
PHC3-213ENST00000491258 EDAQ92838 391 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 ZFYVE21Q9BQ24 234 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 PDGFDQ9GZP0 370 aaPredicted RBP6.6□□□□□ -1.35
PHC3-213ENST00000491258 IPPKQ9H8X2 491 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 OAZ3Q9UMX2 235 aa6.6□□□□□ -1.35
PHC3-213ENST00000491258 CUTAO60888 179 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 RAD17O75943 681 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 CR2P20023 1033 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 EPHA5P54756 1037 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 DGCR2P98153 550 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 PTH1RQ03431 593 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 IGFL4Q6B9Z1 124 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
PHC3-213ENST00000491258 OR14A2Q96R54 314 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 DPYSL5Q9BPU6 564 aa6.59□□□□□ -1.35
PHC3-213ENST00000491258 CDC14BO60729 498 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 PABPC1P11940 636 aaKnown RBP6.58□□□□□ -1.36
PHC3-213ENST00000491258 IFRD2Q12894 506 aaPredicted RBP6.58□□□□□ -1.36
PHC3-213ENST00000491258 TOP3AQ13472 1001 aaPredicted RBP6.58□□□□□ -1.36
PHC3-213ENST00000491258 LSM12Q3MHD2 195 aaKnown RBP6.58□□□□□ -1.36
PHC3-213ENST00000491258 ZMAT1Q5H9K5 638 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 BTBD8Q5XKL5 378 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 DPP8Q6V1X1 898 aaPredicted RBP6.58□□□□□ -1.36
PHC3-213ENST00000491258 NSMFQ6X4W1 530 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 POLNQ7Z5Q5 900 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 SGSM3Q96HU1 749 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 ALG1Q9BT22 464 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 C12orf65Q9H3J6 166 aaKnown RBP6.58□□□□□ -1.36
PHC3-213ENST00000491258 NR2E1Q9Y466 385 aa6.58□□□□□ -1.36
PHC3-213ENST00000491258 IQCA1LA6NCM1 817 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 FGRP09769 529 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 FGFR1P11362 822 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 DBPQ10586 325 aaPredicted RBP6.57□□□□□ -1.36
PHC3-213ENST00000491258 WDR72Q3MJ13 1102 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 OSBP2Q969R2 916 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 CHFRQ96EP1 664 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 ARHGEF4Q9NR80 690 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 RIC8BQ9NVN3 520 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 C11orf21Q9P2W6 132 aa6.57□□□□□ -1.36
PHC3-213ENST00000491258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.56□□□□□ -1.36
PHC3-213ENST00000491258 MCM7P33993 719 aa6.56□□□□□ -1.36
PHC3-213ENST00000491258 DDR2Q16832 855 aa6.56□□□□□ -1.36
PHC3-213ENST00000491258 Q6ZSN1 163 aa6.56□□□□□ -1.36
PHC3-213ENST00000491258 C1orf210Q8IVY1 113 aa6.56□□□□□ -1.36
PHC3-213ENST00000491258 SH3RF2Q8TEC5 729 aa6.56□□□□□ -1.36
PHC3-213ENST00000491258 FAM89AQ96GI7 184 aa6.56□□□□□ -1.36
PHC3-213ENST00000491258 WDR33Q9C0J8 1336 aaKnown RBP6.55□□□□□ -1.36
PHC3-213ENST00000491258 TRAV20A0A0B4J274 112 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 PLSCR1O15162 318 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 NARSO43776 548 aaKnown RBP6.55□□□□□ -1.36
PHC3-213ENST00000491258 ETV4P43268 484 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 ARID5AQ03989 594 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 SCYL1Q96KG9 808 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 PLA2G12BQ9BX93 195 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 TRIM8Q9BZR9 551 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 SLC30A1Q9Y6M5 507 aa6.55□□□□□ -1.36
PHC3-213ENST00000491258 ASXL2Q76L83 1435 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 TCRBV5S4A2TA0A5A2 114 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 HMGCRP04035 888 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 C1SP09871 688 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
PHC3-213ENST00000491258 ADCY8P40145 1251 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 KCNQ1P51787 676 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 YOD1Q5VVQ6 348 aaPredicted RBP6.54□□□□□ -1.36
PHC3-213ENST00000491258 MCF2L2Q86YR7 1114 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 PLEKHG4BQ96PX9 1271 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 KIAA1683Q9H0B3 1180 aa6.54□□□□□ -1.36
PHC3-213ENST00000491258 FAM90A27PA6NNH2 459 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 MATN2O00339 956 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 ARHGAP6O43182 974 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 SMN1Q16637 294 aaKnown RBP6.53□□□□□ -1.36
PHC3-213ENST00000491258 MAMDC4Q6UXC1 1216 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 DPH6Q7L8W6 267 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 NLGN4XQ8N0W4 816 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 ZNF808Q8N4W9 903 aaPredicted RBP6.53□□□□□ -1.36
PHC3-213ENST00000491258 ZDHHC5Q9C0B5 715 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
PHC3-213ENST00000491258 SRPK3Q9UPE1 567 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 TRAF6Q9Y4K3 522 aa6.53□□□□□ -1.36
PHC3-213ENST00000491258 DNAJA1P31689 397 aaKnown RBP6.52□□□□□ -1.37
PHC3-213ENST00000491258 INHBEP58166 350 aa6.52□□□□□ -1.37
PHC3-213ENST00000491258 TBR1Q16650 682 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms