RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 TELO2Q9Y4R8 837 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 BDP1A6H8Y1 2624 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 TCF20Q9UGU0 1960 aaKnown RBP12.87□□□□□ -0.35
DUBR-204ENST00000490441 CNTNAP5Q8WYK1 1306 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 COL4A4P53420 1690 aaPredicted RBP12.86□□□□□ -0.35
DUBR-204ENST00000490441 hCG_1984214I3L0E3 225 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 UPP2O95045 317 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 FOSP01100 380 aaPredicted RBP12.86□□□□□ -0.35
DUBR-204ENST00000490441 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
DUBR-204ENST00000490441 ADCY7P51828 1080 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 ADAM17P78536 824 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 GRIK4Q16099 956 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 FAM26DQ5JW98 314 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 ZNF713Q8N859 430 aaPredicted RBP12.86□□□□□ -0.35
DUBR-204ENST00000490441 TNPO1Q92973 898 aaKnown RBP12.86□□□□□ -0.35
DUBR-204ENST00000490441 SAMD11Q96NU1 681 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 GLT8D2Q9H1C3 349 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 RIC8AQ9NPQ8 531 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 TUBE1Q9UJT0 475 aa12.86□□□□□ -0.35
DUBR-204ENST00000490441 KLF18A0A0U1RQI7 1052 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 RPLP2P05387 115 aaKnown RBP12.85□□□□□ -0.35
DUBR-204ENST00000490441 GHRP10912 638 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 BMP1P13497 986 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 KCNQ1P51787 676 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 IGBP1P78318 339 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
DUBR-204ENST00000490441 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
DUBR-204ENST00000490441 RPAINQ86UA6 219 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 TOP1MTQ969P6 601 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 C17orf80Q9BSJ5 609 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 ANO3Q9BYT9 981 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 KCNH7Q9NS40 1196 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 SLC9A2Q9UBY0 812 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 V9GY48 417 aaPredicted RBP12.85□□□□□ -0.35
DUBR-204ENST00000490441 SIP14410 1827 aa12.85□□□□□ -0.35
DUBR-204ENST00000490441 CCDC196A0A1B0GTZ2 297 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 SMCO2A6NFE2 343 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 RRN3P2A6NIE6 340 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 ZNF76P36508 570 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 PSEN1P49768 467 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 RCAN1P53805 252 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 AP3B2Q13367 1082 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 PTPROQ16827 1216 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 ADCK5Q3MIX3 580 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 TSGA10IPQ3SY00 556 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 CEP55Q53EZ4 464 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 RUFY4Q6ZNE9 571 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
DUBR-204ENST00000490441 PGBD1Q96JS3 809 aa12.84□□□□□ -0.35
DUBR-204ENST00000490441 NECAB3Q96P71 396 aaPredicted RBP12.84□□□□□ -0.35
DUBR-204ENST00000490441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.83□□□□□ -0.36
DUBR-204ENST00000490441 MBLAC1A4D2B0 266 aaPredicted RBP12.83□□□□□ -0.36
DUBR-204ENST00000490441 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 M0QZ92 97 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 STXBP3O00186 592 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 CHRNA1P02708 482 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 METAP2P50579 478 aaKnown RBP eCLIP12.83□□□□□ -0.36
DUBR-204ENST00000490441 ACTR2P61160 394 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 EPC2Q52LR7 807 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 DNAJB3Q8WWF6 145 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 OSBPL7Q9BZF2 842 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 FAM49AQ9H0Q0 323 aaPredicted RBP12.83□□□□□ -0.36
DUBR-204ENST00000490441 BARHL2Q9NY43 387 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 NFASCO94856 1347 aa12.83□□□□□ -0.36
DUBR-204ENST00000490441 INSRRP14616 1297 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 SREBF1P36956 1147 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 STAT5BP51692 787 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
DUBR-204ENST00000490441 FUT2Q10981 343 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 LPIN1Q14693 890 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 TIGD5Q53EQ6 642 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 IER5Q5VY09 327 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 CYP2W1Q8TAV3 490 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
DUBR-204ENST00000490441 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
DUBR-204ENST00000490441 IL17RAQ96F46 866 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 PCYT2Q99447 389 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 AGO4Q9HCK5 861 aaKnown RBP12.82□□□□□ -0.36
DUBR-204ENST00000490441 CDY2AQ9Y6F7 541 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 MUC3AQ02505 3323 aa12.82□□□□□ -0.36
DUBR-204ENST00000490441 MYO7AQ13402 2215 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 BACH1O14867 736 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 ARP10275 920 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 CDC27P30260 824 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 AKAP17AQ02040 695 aaKnown RBP12.81□□□□□ -0.36
DUBR-204ENST00000490441 MGAT3Q09327 533 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 GPM6BQ13491 265 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 PLCB4Q15147 1175 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 PFKFB3Q16875 520 aaPredicted RBP12.81□□□□□ -0.36
DUBR-204ENST00000490441 FBXO47Q5MNV8 452 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 MARCH8Q5T0T0 291 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 FAM160B1Q5W0V3 765 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms