RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 PSMD10O75832 226 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 ATG7O95352 703 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 STAT5BP51692 787 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 KRT76Q01546 638 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 SAFBQ15424 915 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 GRIK4Q16099 956 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 UGCGQ16739 394 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 TRIM71Q2Q1W2 868 aaKnown RBP13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 ZNF746Q6NUN9 644 aaPredicted RBP13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 TRMT1LQ7Z2T5 733 aaKnown RBP13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 FBXO18Q8NFZ0 1043 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 VWCEQ96DN2 955 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 ZNF302Q9NR11 478 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 SAMM50Q9Y512 469 aa13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 MYH9P35579 1960 aaKnown RBP13.87□□□□□ -0.19
SMARCD3-213ENST00000489503 SIP14410 1827 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 IGKV6D-21A0A0A0MT36 114 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 CTSHP09668 335 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 PTK7Q13308 1070 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 PPIGQ13427 754 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 FAM160B1Q5W0V3 765 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 MIS18BP1Q6P0N0 1132 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 PDXDC2PQ6P474 469 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 SERINC5Q86VE9 423 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 TET1Q8NFU7 2136 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 RIT2Q99578 217 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 KCNMB3Q9NPA1 279 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 DISC1Q9NRI5 854 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 GABBR1Q9UBS5 961 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 SMC3Q9UQE7 1217 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 IGSF9BQ9UPX0 1349 aa13.86□□□□□ -0.19
SMARCD3-213ENST00000489503 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 IQCF3P0C7M6 154 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 CKBP12277 381 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 INSRRP14616 1297 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 ATP4AP20648 1035 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 THPOP40225 353 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 FXR1P51114 621 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 ADAM17P78536 824 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 BFSP2Q13515 415 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 GNL2Q13823 731 aaKnown RBP13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 NBR1Q14596 966 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 TMEM240Q5SV17 173 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 ZNF618Q5T7W0 954 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 TRAF7Q6Q0C0 670 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 LRRC8DQ7L1W4 858 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 MIER3Q7Z3K6 550 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 CCDC155Q8N6L0 562 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 RETREG2Q8NC44 543 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 HAS1Q92839 578 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 LRCH3Q96II8 777 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 IL23AQ9NPF7 189 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 TUBE1Q9UJT0 475 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 VAV3Q9UKW4 847 aa13.85□□□□□ -0.19
SMARCD3-213ENST00000489503 A0A1W2PPC1 479 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 POTEB3A0JP26 581 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 EML1O00423 815 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 ZNF862O60290 1169 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 PSAPP07602 524 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 SELPP16109 830 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 MCM7P33993 719 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 CUL4AQ13619 759 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 MBTPS1Q14703 1052 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 MARCH8Q5T0T0 291 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 POTEBQ6S5H4 581 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 B3GNT9Q6UX72 402 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 PLPPR4Q7Z2D5 763 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 CKAP2LQ8IYA6 745 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 AFAP1L1Q8TED9 768 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 OSBPL7Q9BZF2 842 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 FAM49AQ9H0Q0 323 aaPredicted RBP13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 TMEM60Q9H2L4 133 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 FOXP1Q9H334 677 aaPredicted RBP13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 NRCAMQ92823 1304 aa13.84□□□□□ -0.19
SMARCD3-213ENST00000489503 TMEM150BA6NC51 233 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 MARCH6O60337 910 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 NEMFO60524 1076 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 JAK3P52333 1124 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 PRKCEQ02156 737 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 RBL2Q08999 1139 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 GPNMBQ14956 572 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 ZNF174Q15697 407 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 CALCRLQ16602 461 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 TCTN1Q2MV58 587 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms