RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 NEDD9Q14511 834 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 POSTNQ15063 836 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 HYIQ5T013 277 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 MORN1Q5T089 497 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 SV2BQ7L1I2 683 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 ARMCX2Q7L311 632 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 KCTD17Q8N5Z5 321 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 NEK9Q8TD19 979 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 MORC4Q8TE76 937 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 SOCS4Q8WXH5 440 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 PAGE5Q96GU1 130 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 PNMA5Q96PV4 448 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 SENP7Q9BQF6 1050 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 POLR3CQ9BUI4 534 aaPredicted RBP8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 LRRC27Q9C0I9 530 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 MCOLN1Q9GZU1 580 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 CUEDC2Q9H467 287 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 MAGEF1Q9HAY2 307 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 TUFT1Q9NNX1 390 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 RNF186Q9NXI6 227 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 STK17AQ9UEE5 414 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 KIAA1024Q9UPX6 916 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 NFASCO94856 1347 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 PLXNB2O15031 1838 aa8.47□□□□□ -1.05
APOBEC3A-203ENST00000488758 WDR64B1ANS9 1081 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 DHX15O43143 795 aaKnown RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 MED24O75448 989 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 SMC2O95347 1197 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 P4HBP07237 508 aaKnown RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCDC192P0DO97 292 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 CYP2B6P20813 491 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 MUTP22033 750 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 SP3Q02447 781 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 GRB10Q13322 594 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 CTTNQ14247 550 aaKnown RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 DHX8Q14562 1220 aaKnown RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 TTLL4Q14679 1199 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 TMEM119Q4V9L6 283 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZNF746Q6NUN9 644 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 LRSAM1Q6UWE0 723 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 MAMDC4Q6UXC1 1216 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 CATSPER3Q86XQ3 398 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 TPH2Q8IWU9 490 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 MSL3Q8N5Y2 521 aaKnown RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 RDM1Q8NG50 284 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 NPLOC4Q8TAT6 608 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 DYDC2Q96IM9 177 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 MAML3Q96JK9 1138 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 TINF2Q9BSI4 451 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 MLXIPQ9HAP2 919 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 JPH1Q9HDC5 661 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 VTA1Q9NP79 307 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 RGL1Q9NZL6 768 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 SLC9A2Q9UBY0 812 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 DNM3Q9UQ16 869 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 LCTP09848 1927 aa8.46□□□□□ -1.06
APOBEC3A-203ENST00000488758 SORBS3O60504 671 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 DKC1O60832 514 aaKnown RBP eCLIP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SLITRK3O94933 977 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 GGPS1O95749 300 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 MYL1P05976 194 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 PSAPP07602 524 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 HOXC6P09630 235 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SPATA31C1P0DKV0 1188 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 TXNP10599 105 aaKnown RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 HOXD10P28358 340 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 LACTBP83111 547 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SP2Q02086 613 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SP4Q02446 784 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 CYP4A11Q02928 519 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 PNOCQ13519 176 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 MCM6Q14566 821 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARHGEF6Q15052 776 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 ECM1Q16610 540 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 LY6KQ17RY6 165 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 MIS18BP1Q6P0N0 1132 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 PDXDC2PQ6P474 469 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 B3GNT9Q6UX72 402 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 RBM43Q6ZSC3 357 aaKnown RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 CYFIP1Q7L576 1253 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 FBXO16Q8IX29 292 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 DHX37Q8IY37 1157 aaKnown RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SMAP1Q8IYB5 467 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 GRAMD1CQ8IYS0 662 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SCFD2Q8WU76 684 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 LARP4BQ92615 738 aaKnown RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 RAD54LQ92698 747 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 STAMQ92783 540 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 ERCC4Q92889 916 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SMARCE1Q969G3 411 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCDC47Q96A33 483 aaKnown RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 NACC1Q96RE7 527 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 HSD17B14Q9BPX1 270 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms