RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 ATP6V0A1Q93050 837 aa19.21■□□□□ 0.67
CDK5RAP1-214ENST00000488723 GJA10Q969M2 543 aa19.21■□□□□ 0.67
CDK5RAP1-214ENST00000488723 ZNF396Q96N95 335 aaPredicted RBP19.21■□□□□ 0.67
CDK5RAP1-214ENST00000488723 UIMC1Q96RL1 719 aa19.21■□□□□ 0.67
CDK5RAP1-214ENST00000488723 ATP6V1DQ9Y5K8 247 aa19.21■□□□□ 0.67
CDK5RAP1-214ENST00000488723 WDR81Q562E7 1941 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 P4HBP07237 508 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 GNAT1P11488 350 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 DDIT3P35638 169 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ATN1P54259 1190 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PSMC6P62333 389 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 NBR1Q14596 966 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 LRRC26Q2I0M4 334 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 DTHD1Q6ZMT9 781 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 CCDC60Q8IWA6 550 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 C7orf31Q8N865 590 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 NEK9Q8TD19 979 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 NRCAMQ92823 1304 aa19.2■□□□□ 0.66
CDK5RAP1-214ENST00000488723 DCDC2CA8MYV0 355 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 EML1O00423 815 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TLR3O15455 904 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 CHMP2AO43633 222 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 CAPN15O75808 1086 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 HOXC8P31273 242 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 RTP1P59025 263 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PSMC5P62195 406 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PKP1Q13835 747 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 SF3A1Q15459 793 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PDXDC2PQ6P474 469 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 BBXQ8WY36 941 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 FAM167AQ96KS9 214 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 HSD17B14Q9BPX1 270 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 GABBR1Q9UBS5 961 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 GTF2IRD1Q9UHL9 959 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 CIZ1Q9ULV3 898 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 RBM19Q9Y4C8 960 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 IGSF9BQ9UPX0 1349 aa19.19■□□□□ 0.66
CDK5RAP1-214ENST00000488723 RRN3P2A6NIE6 340 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 HBP1O60381 514 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 CD4P01730 458 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 MUTP22033 750 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TECP42680 631 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 QARSP47897 775 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TLE2Q04725 743 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TRIM50Q86XT4 487 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 FAM126BQ8IXS8 530 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 IGSF22Q8N9C0 903 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ERMNQ8TAM6 284 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ATP8B4Q8TF62 1192 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 RNPEPQ9H4A4 650 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TSHZ2Q9NRE2 1034 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 NRBP2Q9NSY0 501 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 CFAP45Q9UL16 551 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ZDHHC9Q9Y397 364 aa19.18■□□□□ 0.66
CDK5RAP1-214ENST00000488723 POTEB3A0JP26 581 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 EVI5O60447 810 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 SMIM10L2AP0DMW4 78 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 SMIM10L2BP0DMW5 78 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 NASPP49321 788 aaPredicted RBP19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 SLC39A14Q15043 492 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PLCB4Q15147 1175 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PTPAQ15257 358 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TRIM60Q495X7 471 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 NCAPH2Q6IBW4 605 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 POTEBQ6S5H4 581 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 KCTD17Q8N5Z5 321 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ZSWIM4Q9H7M6 989 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 HDAC6Q9UBN7 1215 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 NR2E3Q9Y5X4 410 aa19.17■□□□□ 0.66
CDK5RAP1-214ENST00000488723 SLC26A4O43511 780 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 LYPLA2O95372 231 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 RPLP2P05387 115 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 XRCC6P12956 609 aaKnown RBP eCLIP19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ATP4AP20648 1035 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ADAM17P78536 824 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 MLLT1Q03111 559 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 XKR3Q5GH77 459 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ZNF484Q5JVG2 852 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 C4orf19Q8IY42 314 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 DPF3Q92784 378 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 AK8Q96MA6 479 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 EIF2AK1Q9BQI3 630 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 POLR3CQ9BUI4 534 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TUFT1Q9NNX1 390 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 LRWD1Q9UFC0 647 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 ATP11BQ9Y2G3 1177 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PPME1Q9Y570 386 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 CLIC4Q9Y696 253 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 COL1A2P08123 1366 aa19.16■□□□□ 0.66
CDK5RAP1-214ENST00000488723 TNRC18O15417 2968 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 C17orf102A2RUQ5 167 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 PQBP1O60828 265 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 SLITRK3O94933 977 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 YEATS4O95619 227 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 RPA1P27694 616 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 FAAP100Q0VG06 881 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 FAM47CQ5HY64 1035 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 HAUS3Q68CZ6 603 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 FAM173BQ6P4H8 233 aa19.15■□□□□ 0.66
CDK5RAP1-214ENST00000488723 USP28Q96RU2 1077 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms