RNA–Protein interactions for RNA: ENST00000487452.1

PPP1R35-204, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 2

Gene PPP1R35, Length 965 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-204	ENST00000487452	BRAP	Q7Z569	592 aa		31.54	■■■□□ 2.64
PPP1R35-204	ENST00000487452	RNPEP	Q9H4A4	650 aa		31.54	■■■□□ 2.64
PPP1R35-204	ENST00000487452	NRCAM	Q92823	1304 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	C17orf102	A2RUQ5	167 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	TRIM43B	A6NCK2	446 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	WNT7A	O00755	349 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	CHMP2A	O43633	222 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	SYN1	P17600	705 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	ZNF174	Q15697	407 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	GDF6	Q6KF10	455 aa	Predicted RBP	31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	SH3RF1	Q7Z6J0	888 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	CCDC60	Q8IWA6	550 aa	Predicted RBP	31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	TRIM43	Q96BQ3	446 aa	Predicted RBP	31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	MTMR9	Q96QG7	549 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	VAV3	Q9UKW4	847 aa		31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	MAFB	Q9Y5Q3	323 aa	Predicted RBP	31.53	■■■□□ 2.64
PPP1R35-204	ENST00000487452	RAG1	P15918	1043 aa		31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	MARK3	P27448	753 aa		31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	HOXC8	P31273	242 aa		31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	BECN1	Q14457	450 aa		31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	PDXDC2P	Q6P474	469 aa		31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	PPP1R13L	Q8WUF5	828 aa		31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	LBHD1	Q9BQE6	289 aa	Predicted RBP	31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	PCDHA12	Q9UN75	941 aa		31.52	■■■□□ 2.64
PPP1R35-204	ENST00000487452	TOB1	P50616	345 aa	Predicted RBP	31.51	■■■□□ 2.63
PPP1R35-204	ENST00000487452	GABBR1	Q9UBS5	961 aa		31.51	■■■□□ 2.63
PPP1R35-204	ENST00000487452	COLQ	Q9Y215	455 aa	Predicted RBP	31.51	■■■□□ 2.63
PPP1R35-204	ENST00000487452	POTEB3	A0JP26	581 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	RRN3P2	A6NIE6	340 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	TIMP1	P01033	207 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	PPFIA1	Q13136	1202 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	PLCB4	Q15147	1175 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	POTEB	Q6S5H4	581 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	CCDC155	Q8N6L0	562 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	ATP8B4	Q8TF62	1192 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	ATP6V0A1	Q93050	837 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	HIPK3	Q9H422	1215 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	TRPC6	Q9Y210	931 aa		31.5	■■■□□ 2.63
PPP1R35-204	ENST00000487452	STX6	O43752	255 aa		31.49	■■■□□ 2.63
PPP1R35-204	ENST00000487452	PTK7	Q13308	1070 aa		31.49	■■■□□ 2.63
PPP1R35-204	ENST00000487452	FAM167A	Q96KS9	214 aa		31.49	■■■□□ 2.63
PPP1R35-204	ENST00000487452	NOC4L	Q9BVI4	516 aa	Known RBP	31.49	■■■□□ 2.63
PPP1R35-204	ENST00000487452	TTC12	Q9H892	705 aa	Predicted RBP	31.49	■■■□□ 2.63
PPP1R35-204	ENST00000487452	SETD4	Q9NVD3	440 aa		31.49	■■■□□ 2.63
PPP1R35-204	ENST00000487452	IGSF9B	Q9UPX0	1349 aa		31.49	■■■□□ 2.63
PPP1R35-204	ENST00000487452	LAD1	O00515	517 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	HBP1	O60381	514 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	OR52Z1	P0C646	297 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	TXK	P42681	527 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	BFSP2	Q13515	415 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	CHRDL2	Q6WN34	429 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	CKAP2L	Q8IYA6	745 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	CAGE1	Q8TC20	777 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	TMEM60	Q9H2L4	133 aa		31.48	■■■□□ 2.63
PPP1R35-204	ENST00000487452	DKC1	O60832	514 aa	Known RBP eCLIP	31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	CYP2C9	P11712	490 aa		31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	EPHA7	Q15375	998 aa		31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	GRIK4	Q16099	956 aa		31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	LMBR1	Q8WVP7	490 aa		31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	BBX	Q8WY36	941 aa	Predicted RBP	31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	CTAGE1	Q96RT6	745 aa		31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	MTMR6	Q9Y217	621 aa		31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	PCDHB6	Q9Y5E3	794 aa		31.47	■■■□□ 2.63
PPP1R35-204	ENST00000487452	PITPNM1	O00562	1244 aa		31.46	■■■□□ 2.63
PPP1R35-204	ENST00000487452	INSRR	P14616	1297 aa		31.46	■■■□□ 2.63
PPP1R35-204	ENST00000487452	ADAM17	P78536	824 aa		31.46	■■■□□ 2.63
PPP1R35-204	ENST00000487452	SPIRE1	Q08AE8	756 aa		31.46	■■■□□ 2.63
PPP1R35-204	ENST00000487452	SERINC5	Q86VE9	423 aa		31.46	■■■□□ 2.63
PPP1R35-204	ENST00000487452	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	31.46	■■■□□ 2.63
PPP1R35-204	ENST00000487452	NRBP2	Q9NSY0	501 aa		31.46	■■■□□ 2.63
PPP1R35-204	ENST00000487452	EML1	O00423	815 aa		31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	MAGEA10	P43363	369 aa	Predicted RBP	31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	ZNF200	P98182	395 aa	Predicted RBP	31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	NBR1	Q14596	966 aa		31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	HABP4	Q5JVS0	413 aa	Known RBP	31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	NCAPH2	Q6IBW4	605 aa		31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	MFSD5	Q6N075	450 aa		31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	FERMT3	Q86UX7	667 aa		31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	RETREG2	Q8NC44	543 aa		31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	31.45	■■■□□ 2.63
PPP1R35-204	ENST00000487452	COL1A2	P08123	1366 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	P4HB	P07237	508 aa	Known RBP	31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	ATP4A	P20648	1035 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	PSMC5	P62195	406 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	RBL2	Q08999	1139 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	PTGDR	Q13258	359 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	HIC1	Q14526	733 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	TMEM266	Q2M3C6	531 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	ZNF484	Q5JVG2	852 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	TMEM199	Q8N511	208 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	C4orf32	Q8N8J7	132 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	BAD	Q92934	168 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	PPP1R12C	Q9BZL4	782 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	CEP131	Q9UPN4	1083 aa		31.44	■■■□□ 2.62
PPP1R35-204	ENST00000487452	TREH	O43280	583 aa		31.43	■■■□□ 2.62
PPP1R35-204	ENST00000487452	ITGB8	P26012	769 aa		31.43	■■■□□ 2.62
PPP1R35-204	ENST00000487452	QARS	P47897	775 aa	Known RBP	31.43	■■■□□ 2.62
PPP1R35-204	ENST00000487452	TAF2	Q6P1X5	1199 aa		31.43	■■■□□ 2.62
PPP1R35-204	ENST00000487452	GDF15	Q99988	308 aa		31.43	■■■□□ 2.62
PPP1R35-204	ENST00000487452	TUBE1	Q9UJT0	475 aa		31.43	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms