RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 BIRC3Q13489 604 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 FOXR1Q6PIV2 292 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 HHIPL2Q6UWX4 724 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 SYT2Q8N9I0 419 aaPredicted RBP13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 GPCPD1Q9NPB8 672 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 HDAC9Q9UKV0 1011 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 GRIN2DO15399 1336 aa13.58□□□□□ -0.24
TMEM39B-208ENST00000487305 A0A087X0T9 212 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 NKRFO15226 690 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 NCK2O43639 380 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 PPP1R12BO60237 982 aaPredicted RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 TRIM37O94972 964 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 SSBP05455 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 GLI1P08151 1106 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 FAM228BP0C875 321 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 AKR1B1P15121 316 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 FERP16591 822 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 NR2F2P24468 414 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 EXOC3L4Q17RC7 722 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 EPM2AIP1Q7L775 607 aaPredicted RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 LRRC47Q8N1G4 583 aaKnown RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 ANKRD13CQ8N6S4 541 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 TSEN2Q8NCE0 465 aaKnown RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 CCDC26Q8TAB7 109 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 ATP6V1G3Q96LB4 118 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 MRIQ9BWK5 157 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 TYW1Q9NV66 732 aaKnown RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 SUCLA2Q9P2R7 463 aaPredicted RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 ADAMTS1Q9UHI8 967 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 TTC7AQ9ULT0 858 aaPredicted RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 SYNPO2Q9UMS6 1093 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 PGRMC1O00264 195 aaKnown RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 KIF4AO95239 1232 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 UCHL3P15374 230 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 MUTP22033 750 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 ECM1Q16610 540 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 ARMC9Q7Z3E5 817 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 IRF2BP2Q7Z5L9 587 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 SLFN11Q7Z7L1 901 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 SP8Q8IXZ3 490 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 CCDC43Q96MW1 224 aaKnown RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 NAP1L3Q99457 506 aaPredicted RBP13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 EPN3Q9H201 632 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 FAM169AQ9Y6X4 670 aa13.57□□□□□ -0.24
TMEM39B-208ENST00000487305 UBE4BO95155 1302 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 LRRC37AA6NMS7 1700 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 KLRG2A4D1S0 409 aaPredicted RBP13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 BHMG1C9JSJ3 638 aaPredicted RBP13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 NDUFAB1O14561 156 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 KIAA0754O94854 1291 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 CCT5P48643 541 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 CARSP49589 748 aaKnown RBP13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 CDR1P51861 262 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 SLC15A2Q16348 729 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 FAM133AQ8N9E0 248 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 KRT12Q99456 494 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.56□□□□□ -0.248e-8■■■□□ 15.1
TMEM39B-208ENST00000487305 MKNK1Q9BUB5 465 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 POLR3CQ9BUI4 534 aaPredicted RBP13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 KANSL2Q9H9L4 492 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 OLFML3Q9NRN5 406 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 NAGPAQ9UK23 515 aa13.56□□□□□ -0.24
TMEM39B-208ENST00000487305 PPP1R11O60927 126 aaPredicted RBP13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 ERLIN2O94905 339 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 RFX1P22670 979 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 CIITAP33076 1130 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 NOP2P46087 812 aaKnown RBP13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 DRP2Q13474 957 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 UBE2SQ16763 222 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 STXBP4Q6ZWJ1 553 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 RASGEF1CQ8N431 466 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 LRRC57Q8N9N7 239 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 CRYGNQ8WXF5 182 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 IFT81Q8WYA0 676 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 PSMB7Q99436 277 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 NENFQ9UMX5 172 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 E9PMD0 336 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 H2AFZP0C0S5 128 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 NR1D1P20393 614 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 LMNB1P20700 586 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 SHMT1P34896 483 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 MMP14P50281 582 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 PTK2Q05397 1052 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 GIT2Q14161 759 aa13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 ALKBH5Q6P6C2 394 aaKnown RBP13.55□□□□□ -0.24
TMEM39B-208ENST00000487305 H2AFVQ71UI9 128 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms