RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 NAALADL2Q58DX5 795 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 NCAPH2Q6IBW4 605 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 CCDC60Q8IWA6 550 aaPredicted RBP17.78■□□□□ 0.44
APOE-205ENST00000485628 RGL1Q9NZL6 768 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 MYADML2A6NDP7 307 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 CHMP2AO43633 222 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 SORBS3O60504 671 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 PSAPP07602 524 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 CNGA1P29973 690 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 TCF7P36402 384 aaPredicted RBP17.77■□□□□ 0.44
APOE-205ENST00000485628 KRT79Q5XKE5 535 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 MIS18BP1Q6P0N0 1132 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 PLPPR4Q7Z2D5 763 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 CABP7Q86V35 215 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 C4orf19Q8IY42 314 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 FMR1NBQ8N0W7 255 aaPredicted RBP17.77■□□□□ 0.44
APOE-205ENST00000485628 MRPS27Q92552 414 aaKnown RBP17.77■□□□□ 0.44
APOE-205ENST00000485628 DYDC2Q96IM9 177 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 CRISPLD2Q9H0B8 497 aa17.77■□□□□ 0.44
APOE-205ENST00000485628 SCN10AQ9Y5Y9 1956 aa17.77■□□□□ 0.43
APOE-205ENST00000485628 A0A1B0GVL5 298 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
APOE-205ENST00000485628 CCL5P13501 91 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 PFKFB1P16118 471 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 UBA7P41226 1012 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 QARSP47897 775 aaKnown RBP17.76■□□□□ 0.43
APOE-205ENST00000485628 NDUFA8P51970 172 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 PSMC5P62195 406 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 FSCN1Q16658 493 aaKnown RBP17.76■□□□□ 0.43
APOE-205ENST00000485628 DGKDQ16760 1214 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 HAUS3Q68CZ6 603 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 SWSAP1Q6NVH7 229 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 KCNK18Q7Z418 384 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 SNX29Q8TEQ0 813 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 KAT2BQ92831 832 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 BLOC1S4Q9NUP1 217 aa17.76■□□□□ 0.43
APOE-205ENST00000485628 HAS3O00219 553 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 PGK1P00558 417 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 LGALS2P05162 132 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 LIG1P18858 919 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 CPT1AP50416 773 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 STAT5BP51692 787 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
APOE-205ENST00000485628 FSIP1Q8NA03 581 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 ERMNQ8TAM6 284 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 CEP89Q96ST8 783 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 LXNQ9BS40 222 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 MCOLN1Q9GZU1 580 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 NT5C3AQ9H0P0 336 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 AP5M1Q9H0R1 490 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 ZSWIM4Q9H7M6 989 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 GABBR1Q9UBS5 961 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 OGDHLQ9ULD0 1010 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
APOE-205ENST00000485628 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 NOP56O00567 594 aaKnown RBP17.74■□□□□ 0.43
APOE-205ENST00000485628 KPNA6O60684 536 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 F2P00734 622 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 CCT6AP40227 531 aaKnown RBP17.74■□□□□ 0.43
APOE-205ENST00000485628 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
APOE-205ENST00000485628 SLC26A2P50443 739 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 PSMC6P62333 389 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 PURAQ00577 322 aaKnown RBP17.74■□□□□ 0.43
APOE-205ENST00000485628 SP4Q02446 784 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 CTTNQ14247 550 aaKnown RBP17.74■□□□□ 0.43
APOE-205ENST00000485628 LRRC41Q15345 812 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 BANK1Q8NDB2 785 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 GPT2Q8TD30 523 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 TSEN34Q9BSV6 310 aaKnown RBP17.74■□□□□ 0.43
APOE-205ENST00000485628 SMARCAD1Q9H4L7 1026 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 ZNF302Q9NR11 478 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 FAM13BQ9NYF5 915 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 TCEAL9Q9UHQ7 104 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 SAMM50Q9Y512 469 aa17.74■□□□□ 0.43
APOE-205ENST00000485628 KDM3AQ9Y4C1 1321 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 LOXHD1Q8IVV2 1947 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 GOLGA6L22H0YM25 854 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 ZBTB39O15060 712 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 ACTN4O43707 911 aaKnown RBP17.73■□□□□ 0.43
APOE-205ENST00000485628 GJB1P08034 283 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 PLCG1P19174 1290 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 BEX3Q00994 111 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 CYP4A11Q02928 519 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 FAM160A1Q05DH4 1040 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 TARBP2Q15633 366 aaKnown RBP17.73■□□□□ 0.43
APOE-205ENST00000485628 PDXDC2PQ6P474 469 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 ANO5Q75V66 913 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 SH3RF1Q7Z6J0 888 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 ELOA2Q8IYF1 753 aaPredicted RBP17.73■□□□□ 0.43
APOE-205ENST00000485628 ATP6V0A1Q93050 837 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 MTRQ99707 1265 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 NIFKQ9BYG3 293 aaKnown RBP17.73■□□□□ 0.43
APOE-205ENST00000485628 RNF208Q9H0X6 261 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 KIAA1024Q9UPX6 916 aa17.73■□□□□ 0.43
APOE-205ENST00000485628 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
APOE-205ENST00000485628 DDX11L8A8MPP1 907 aa17.72■□□□□ 0.43
APOE-205ENST00000485628 ZBTB42B2RXF5 422 aa17.72■□□□□ 0.43
APOE-205ENST00000485628 POLR2DO15514 142 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms