RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CYP2C9P11712 490 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 JAK3P52333 1124 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 CHMP4BP1P59074 171 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 PTK7Q13308 1070 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 BFSP2Q13515 415 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 HIC1Q14526 733 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 FAM160B1Q5W0V3 765 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 SERINC5Q86VE9 423 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 PPP1R13LQ8WUF5 828 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 NOD1Q9Y239 953 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 K7ELQ4 463 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-213ENST00000485080 PSAPP07602 524 aa20.08■□□□□ 0.81
SREBF1-213ENST00000485080 PPP2R5CQ13362 524 aa20.08■□□□□ 0.81
SREBF1-213ENST00000485080 CCDC60Q8IWA6 550 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-213ENST00000485080 SLFN12Q8IYM2 578 aa20.08■□□□□ 0.81
SREBF1-213ENST00000485080 TMEM199Q8N511 208 aa20.08■□□□□ 0.81
SREBF1-213ENST00000485080 CCDC155Q8N6L0 562 aa20.08■□□□□ 0.81
SREBF1-213ENST00000485080 HAS1Q92839 578 aa20.08■□□□□ 0.81
SREBF1-213ENST00000485080 DISC1Q9NRI5 854 aa20.08■□□□□ 0.81
SREBF1-213ENST00000485080 MBLAC1A4D2B0 266 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-213ENST00000485080 RRN3P2A6NIE6 340 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 FPGSQ05932 587 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 PPIGQ13427 754 aaKnown RBP eCLIP20.07■□□□□ 0.85e-13■■■■□ 19.4
SREBF1-213ENST00000485080 PLCB4Q15147 1175 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 TRIM71Q2Q1W2 868 aaKnown RBP20.07■□□□□ 0.8
SREBF1-213ENST00000485080 LMBR1Q8WVP7 490 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 DHX38Q92620 1227 aaKnown RBP20.07■□□□□ 0.8
SREBF1-213ENST00000485080 UIMC1Q96RL1 719 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 UBE2OQ9C0C9 1292 aaKnown RBP20.07■□□□□ 0.8
SREBF1-213ENST00000485080 WNT8AQ9H1J5 351 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 UNC45AQ9H3U1 944 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 ZNF302Q9NR11 478 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 VAV3Q9UKW4 847 aa20.07■□□□□ 0.8
SREBF1-213ENST00000485080 MYH9P35579 1960 aaKnown RBP20.06■□□□□ 0.8
SREBF1-213ENST00000485080 IGSF9BQ9UPX0 1349 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 BACH1O14867 736 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 CAND2O75155 1236 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 CYP2C18P33260 490 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 PPFIA1Q13136 1202 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 MAPK8IP2Q13387 824 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-213ENST00000485080 SWSAP1Q6NVH7 229 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 RPAINQ86UA6 219 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 ATP8B4Q8TF62 1192 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 ATP6V0A1Q93050 837 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 MTMR9Q96QG7 549 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 PPP1R12CQ9BZL4 782 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 SETD4Q9NVD3 440 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 WDR81Q562E7 1941 aa20.06■□□□□ 0.8
SREBF1-213ENST00000485080 UMODL1Q5DID0 1318 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 WNT7AO00755 349 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 TREHO43280 583 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 HBP1O60381 514 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 BAG4O95429 457 aaKnown RBP20.05■□□□□ 0.8
SREBF1-213ENST00000485080 PARNO95453 639 aaKnown RBP20.05■□□□□ 0.8
SREBF1-213ENST00000485080 PDCP20941 246 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 MARK3P27448 753 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 RFC2P35250 354 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 ZNF200P98182 395 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-213ENST00000485080 GRIK4Q16099 956 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 LARP1BQ659C4 914 aaKnown RBP20.05■□□□□ 0.8
SREBF1-213ENST00000485080 PDXDC2PQ6P474 469 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 RETREG2Q8NC44 543 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 GJA10Q969M2 543 aa20.05■□□□□ 0.8
SREBF1-213ENST00000485080 POTEB3A0JP26 581 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 NEMFO60524 1076 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 RPLP2P05387 115 aaKnown RBP20.04■□□□□ 0.8
SREBF1-213ENST00000485080 INSRRP14616 1297 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 ATP4AP20648 1035 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 SPIRE1Q08AE8 756 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 GNL2Q13823 731 aaKnown RBP20.04■□□□□ 0.8
SREBF1-213ENST00000485080 MARCH8Q5T0T0 291 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 TAF2Q6P1X5 1199 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 POTEBQ6S5H4 581 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 TDHQ8IZJ6 230 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 FAM167AQ96KS9 214 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 IL23AQ9NPF7 189 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 PCDH10Q9P2E7 1040 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 NOL7Q9UMY1 257 aaKnown RBP20.04■□□□□ 0.8
SREBF1-213ENST00000485080 SAMM50Q9Y512 469 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 COL1A2P08123 1366 aa20.04■□□□□ 0.8
SREBF1-213ENST00000485080 H3BQV1 296 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 PFKMP08237 780 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 IQCF3P0C7M6 154 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 CKBP12277 381 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 CSF2RAP15509 400 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 SELPP16109 830 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 EPHB4P54760 987 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 CALCRLQ16602 461 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 ZNF484Q5JVG2 852 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 MIER3Q7Z3K6 550 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 RPUSD2Q8IZ73 545 aaKnown RBP20.03■□□□□ 0.8
SREBF1-213ENST00000485080 BBXQ8WY36 941 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-213ENST00000485080 VWCEQ96DN2 955 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 GABBR1Q9UBS5 961 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 TRPC6Q9Y210 931 aa20.03■□□□□ 0.8
SREBF1-213ENST00000485080 ZNF862O60290 1169 aa20.02■□□□□ 0.8
SREBF1-213ENST00000485080 MARCH6O60337 910 aa20.02■□□□□ 0.8
SREBF1-213ENST00000485080 TOB1P50616 345 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-213ENST00000485080 CCL23P55773 120 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms