RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 LPIN1Q14693 890 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 GNPTABQ3T906 1256 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CASC1Q6TDU7 716 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 SUGP1Q8IWZ8 645 aaKnown RBP17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ZNF689Q96CS4 500 aaPredicted RBP17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 RTEL1Q9NZ71 1219 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 DOCK5Q9H7D0 1870 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 LOC730098B7Z3J9 87 aa17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 DDAH1O94760 285 aa17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 EYA4O95677 639 aa17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 METTL7BQ6UX53 244 aa17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 RBM23Q86U06 439 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 IGDCC4Q8TDY8 1250 aa17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 EHMT1Q9H9B1 1298 aa17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 MRPL42Q9Y6G3 142 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SPATA31C2B4DYI2 1134 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PRC1O43663 620 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 DGKIO75912 1065 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 ITGB1P05556 798 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 KIF5BP33176 963 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 MGAT3Q09327 533 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 NFXL1Q6ZNB6 911 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 FBXL6Q8N531 539 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SMARCC2Q8TAQ2 1214 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SPPL3Q8TCT6 385 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 RRP36Q96EU6 259 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PLVAPQ9BX97 442 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SEC63Q9UGP8 760 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 ZNF215Q9UL58 517 aaPredicted RBP17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 BARX2Q9UMQ3 279 aaPredicted RBP17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PCDHGC5Q9Y5F6 944 aa17.63■□□□□ 0.41
HLA-DQB1-208ENST00000484729 NRIP1P48552 1158 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 VCPP55072 806 aaKnown RBP17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 NEDD9Q14511 834 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 EFHBQ8N7U6 833 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SMRP1Q8NCR6 262 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 LINC01599Q8WXQ3 324 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 CUL5Q93034 780 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 INPP4AQ96PE3 977 aaPredicted RBP17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SPZ1Q9BXG8 430 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 USP15Q9Y4E8 981 aaPredicted RBP17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 FRMPD4Q14CM0 1322 aa17.62■□□□□ 0.41
HLA-DQB1-208ENST00000484729 CCDC69A6NI79 296 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 GFRA3O60609 400 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 STAM2O75886 525 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 GLP2RO95838 553 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 ICAM3P32942 547 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 COASYQ13057 564 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PKN1Q16512 942 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PAN2Q504Q3 1202 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 KLHL23Q8NBE8 558 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 DNAJB3Q8WWF6 145 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 P2RX5Q93086 422 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PPP2R3CQ969Q6 453 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 RPGRIP1Q96KN7 1286 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 MAP3K14Q99558 947 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PRRX2Q99811 253 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 AGO3Q9H9G7 860 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 NRCAMQ92823 1304 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 KMT2EQ8IZD2 1858 aa17.61■□□□□ 0.41
HLA-DQB1-208ENST00000484729 TTC3P53804 2025 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SH2B2O14492 632 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 FIBPO43427 364 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 RXRAP19793 462 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 CD52P31358 61 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 MCM5P33992 734 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 GNAQP50148 359 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 RBM10P98175 930 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 CBX2Q14781 532 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 FBXO47Q5MNV8 452 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 USP17L6PQ6QN14 398 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 RTN4RL1Q86UN2 441 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 POF1BQ8WVV4 589 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 ZBTB10Q96DT7 871 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 MTA3Q9BTC8 594 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 LSG1Q9H089 658 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 CDY2AQ9Y6F7 541 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SPTBN4Q9H254 2564 aa17.6■□□□□ 0.41
HLA-DQB1-208ENST00000484729 CACNA1HO95180 2353 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 KIAA1671Q9BY89 1806 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 SLC27A2O14975 620 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PPFIA3O75145 1194 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 MARK3P27448 753 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 GATMP50440 423 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 TAF2Q6P1X5 1199 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 RAB11FIP4Q86YS3 637 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 CMTR2Q8IYT2 770 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 ASIC4Q96FT7 647 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 TMEM87BQ96K49 555 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 ESYT1Q9BSJ8 1104 aa17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 BAZ2BQ9UIF8 2168 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB1-208ENST00000484729 PER2O15055 1255 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TCF7P36402 384 aaPredicted RBP17.58■□□□□ 0.4
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