RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CTCFLQ8NI51 663 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-207ENST00000483969 NUP133Q8WUM0 1156 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 GLMNQ92990 594 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 ZNF333Q96JL9 665 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 JAKMIP1Q96N16 626 aaKnown RBP10.35□□□□□ -0.75
COL8A1-207ENST00000483969 LZTS2Q9BRK4 669 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 LY9Q9HBG7 655 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 DIS3Q9Y2L1 958 aaKnown RBP10.35□□□□□ -0.75
COL8A1-207ENST00000483969 RIPK3Q9Y572 518 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 MAFBQ9Y5Q3 323 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-207ENST00000483969 SLC12A7Q9Y666 1083 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 LAMB1P07942 1786 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 C9orf172C9J069 976 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 DDAH1O94760 285 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 HMGCRP04035 888 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ALAS1P13196 640 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ELNP15502 786 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 CAPN2P17655 700 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 SNAP25P60880 206 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 TBC1D8BQ0IIM8 1120 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 TROAPQ12815 778 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 GRM4Q14833 912 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ADCK5Q3MIX3 580 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 MFSD14CQ5VZR4 134 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 RASGRP2Q7LDG7 609 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ADGRF4Q8IZF3 695 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ZNF654Q8IZM8 581 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ANKRD35Q8N283 1001 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 APBA2Q99767 749 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ACAD9Q9H845 621 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 CCPG1Q9ULG6 757 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
COL8A1-207ENST00000483969 ZNF536O15090 1300 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 DYRK3O43781 588 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 COBLO75128 1261 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 SMARCA1P28370 1054 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 RAC1P63000 192 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 SGMS1Q86VZ5 419 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 PNMA5Q96PV4 448 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 LRRC2Q9BYS8 371 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 MAF1Q9H063 256 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 JMJD4Q9H9V9 463 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 JPH1Q9HDC5 661 aaPredicted RBP10.33□□□□□ -0.76
COL8A1-207ENST00000483969 RNF146Q9NTX7 359 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 CYP46A1Q9Y6A2 500 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 ATAD5Q96QE3 1844 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 RPTORQ8N122 1335 aa10.33□□□□□ -0.76
COL8A1-207ENST00000483969 PCNTO95613 3336 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 CCL5P13501 91 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 PRKCSHP14314 528 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-207ENST00000483969 EPB42P16452 691 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 RPS6KB1P23443 525 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 ANAPC15P60006 121 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 PPP2R5BQ15173 497 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 GRIK4Q16099 956 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 CDC37Q16543 378 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-207ENST00000483969 ZNF792Q3KQV3 632 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 OLFML2BQ68BL8 750 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 RUFY3Q7L099 469 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 FBXO11Q86XK2 927 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 FBXL16Q8N461 479 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 FANCBQ8NB91 859 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 NPLOC4Q8TAT6 608 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 TRIB2Q92519 343 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 RNF208Q9H0X6 261 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 CPVLQ9H3G5 476 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 RIOX1Q9H6W3 641 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 HOMER2Q9NSB8 354 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 MRPL11Q9Y3B7 192 aaKnown RBP10.32□□□□□ -0.76
COL8A1-207ENST00000483969 GTF3C3Q9Y5Q9 886 aa10.32□□□□□ -0.76
COL8A1-207ENST00000483969 A0A0A0MRY4 1105 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 ZBTB5O15062 677 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 ZBTB43O43298 467 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 PGK2P07205 417 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 GJB1P08034 283 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 CASTP20810 708 aaKnown RBP10.31□□□□□ -0.76
COL8A1-207ENST00000483969 CCL14Q16627 93 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 Q6ZUG5 572 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 MCF2L2Q86YR7 1114 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 MSL3Q8N5Y2 521 aaKnown RBP10.31□□□□□ -0.76
COL8A1-207ENST00000483969 RGS22Q8NE09 1264 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 MAML3Q96JK9 1138 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 AMNQ9BXJ7 453 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 RBM28Q9NW13 759 aaKnown RBP10.31□□□□□ -0.76
COL8A1-207ENST00000483969 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
COL8A1-207ENST00000483969 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-207ENST00000483969 PFASO15067 1338 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 ABCB11O95342 1321 aa10.31□□□□□ -0.76
COL8A1-207ENST00000483969 DNAJC25-GNG10A0A024R161 153 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 PNMA6FA0A0J9YX94 578 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 KLF18A0A0U1RQI7 1052 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 CCDC196A0A1B0GTZ2 297 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 TFRCP02786 760 aaKnown RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 CPA1P15085 419 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 IGFBP4P22692 258 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 RCAN1P53805 252 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms