RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 HPS3Q969F9 1004 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 NACC1Q96RE7 527 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 LRRC27Q9C0I9 530 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 KATNBL1Q9H079 304 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 NAT10Q9H0A0 1025 aaKnown RBP11.27□□□□□ -0.61
HDAC6-226ENST00000483656 HSD3B7Q9H2F3 369 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 ZFYVE28Q9HCC9 887 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 JPH1Q9HDC5 661 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-226ENST00000483656 SLC9A2Q9UBY0 812 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
HDAC6-226ENST00000483656 DOCK5Q9H7D0 1870 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 FRMD3A2A2Y4 597 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 ASB14A6NK59 587 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 IKBKBO14920 756 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 CA12O43570 354 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 FARP2O94887 1054 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 ATG7O95352 703 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 SNAI1O95863 264 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 CTGFP29279 349 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 PRCPP42785 496 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 QARSP47897 775 aaKnown RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 ACTR2P61160 394 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 STK4Q13043 487 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 GRM1Q13255 1194 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 GIT2Q14161 759 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 DEFB115Q30KQ5 88 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 CT47A1Q5JQC4 288 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 RINT1Q6NUQ1 792 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 TAPT1Q6NXT6 567 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 MAMDC4Q6UXC1 1216 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 CYFIP1Q7L576 1253 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 USP6NLQ92738 828 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 MAML3Q96JK9 1138 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 CAPNS2Q96L46 248 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 MPHOSPH6Q99547 160 aaKnown RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 RUSC1Q9BVN2 902 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 BHMT2Q9H2M3 363 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 ZSWIM4Q9H7M6 989 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 PDGFCQ9NRA1 345 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 DIS3Q9Y2L1 958 aaKnown RBP11.26□□□□□ -0.61
HDAC6-226ENST00000483656 PCDHA10Q9Y5I2 948 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 SYNGAP1Q96PV0 1343 aa11.26□□□□□ -0.61
HDAC6-226ENST00000483656 ZNF236Q9UL36 1845 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 PLXNA1Q9UIW2 1896 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 MCM3APO60318 1980 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 GSTTP1A0A1W2PQM5 241 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 RBM47A0AV96 593 aaKnown RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 ZNF862O60290 1169 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 SUPT20HL2P0C7V6 817 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 TGFB3P10600 412 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 ERCC5P28715 1186 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 PSMC5P62195 406 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 COASYQ13057 564 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 LY6KQ17RY6 165 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 C1orf186Q6ZWK4 172 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 DPP9Q86TI2 863 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 CCDC60Q8IWA6 550 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 SMAP1Q8IYB5 467 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 ADSSL1Q8N142 457 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 KIAA0895Q8NCT3 520 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 ENOX1Q8TC92 643 aaKnown RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 PCYT2Q99447 389 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 DACH1Q9UI36 760 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 DBR1Q9UK59 544 aaKnown RBP11.25□□□□□ -0.61
HDAC6-226ENST00000483656 GJD2Q9UKL4 321 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 SAMM50Q9Y512 469 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 PCDHA2Q9Y5H9 948 aa11.25□□□□□ -0.61
HDAC6-226ENST00000483656 IGKV6D-21A0A0A0MT36 114 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 TMEM150BA6NC51 233 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 SMTNL1A8MU46 457 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 BECN2A8MW95 431 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 GGPS1O95749 300 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 PSAPP07602 524 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 IDEP14735 1019 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 ATP4AP20648 1035 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 PTGS1P23219 599 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 STX17P56962 302 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 MYL5Q02045 173 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 SP4Q02446 784 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 RAD51AP2Q09MP3 1159 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 MAP2K5Q13163 448 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 NOGQ13253 232 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 NEDD9Q14511 834 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 COBLL1Q53SF7 1204 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 CELF3Q5SZQ8 465 aaKnown RBP11.24□□□□□ -0.61
HDAC6-226ENST00000483656 KLHL10Q6JEL2 608 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 KCNV1Q6PIU1 500 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms