RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 WRAP73Q9P2S5 460 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-205ENST00000482968 CTAGE5O15320 804 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 PSAPP07602 524 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 ELNP15502 786 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 SMPD1P17405 629 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 HSDL1Q3SXM5 330 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 SWSAP1Q6NVH7 229 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 MIS18BP1Q6P0N0 1132 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 ABHD15Q6UXT9 468 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
PHGDH-205ENST00000482968 RAET1EQ8TD07 263 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 CCDC34Q96HJ3 373 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 SPATA33Q96N06 139 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 MTRQ99707 1265 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 LXNQ9BS40 222 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 HOOK1Q9UJC3 728 aaKnown RBP16.82■□□□□ 0.28
PHGDH-205ENST00000482968 DNM3Q9UQ16 869 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 SYCE3A1L190 88 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 NOP56O00567 594 aaKnown RBP16.82■□□□□ 0.28
PHGDH-205ENST00000482968 ZBTB39O15060 712 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 ATG7O95352 703 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 QARSP47897 775 aaKnown RBP16.82■□□□□ 0.28
PHGDH-205ENST00000482968 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-205ENST00000482968 PNOCQ13519 176 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 IRF5Q13568 498 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 MCM6Q14566 821 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 DUSP28Q4G0W2 176 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 NEK9Q8TD19 979 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 PIGOQ8TEQ8 1089 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 SEPT1Q8WYJ6 367 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 LARP4BQ92615 738 aaKnown RBP16.82■□□□□ 0.28
PHGDH-205ENST00000482968 RAD54LQ92698 747 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 CUEDC2Q9H467 287 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 GABBR1Q9UBS5 961 aa16.82■□□□□ 0.28
PHGDH-205ENST00000482968 BACH1O14867 736 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 ADCY6O43306 1168 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 ADCY3O60266 1144 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 LETM1O95202 739 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-205ENST00000482968 GH1P01241 217 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 SUPT20HL2P0C7V6 817 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 CASP1P29466 404 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 ARHGAP1Q07960 439 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 TRIM32Q13049 653 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 LAMC2Q13753 1193 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 POSTNQ15063 836 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 UGCGQ16739 394 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 SV2BQ7L1I2 683 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 SH3RF1Q7Z6J0 888 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 ELOA2Q8IYF1 753 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-205ENST00000482968 TRMT44Q8IYL2 757 aaKnown RBP16.81■□□□□ 0.28
PHGDH-205ENST00000482968 ZSWIM4Q9H7M6 989 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 CASP8AP2Q9UKL3 1982 aa16.81■□□□□ 0.28
PHGDH-205ENST00000482968 WDR81Q562E7 1941 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 SSBP05455 408 aaKnown RBP eCLIP16.8■□□□□ 0.28
PHGDH-205ENST00000482968 MUTP22033 750 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 TCF7P36402 384 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-205ENST00000482968 PSMC5P62195 406 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 CCDC60Q8IWA6 550 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-205ENST00000482968 TRPV1Q8NER1 839 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 NACC1Q96RE7 527 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 GPR20Q99678 358 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 BLZF1Q9H2G9 400 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 KBTBD4Q9NVX7 518 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 FAM184BQ9ULE4 1060 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 TRIM17Q9Y577 477 aa16.8■□□□□ 0.28
PHGDH-205ENST00000482968 PLA2G4BP0C869 781 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-205ENST00000482968 KIAA1468Q9P260 1216 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 CENPFP49454 3210 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 NKRFO15226 690 aaKnown RBP eCLIP16.79■□□□□ 0.28
PHGDH-205ENST00000482968 DYNC1LI2O43237 492 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-205ENST00000482968 CNGA1P29973 690 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 AMPD3Q01432 767 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 CUL4BQ13620 913 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 RBM43Q6ZSC3 357 aaKnown RBP16.79■□□□□ 0.28
PHGDH-205ENST00000482968 C4orf19Q8IY42 314 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 OR6J1Q8NGC5 347 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-205ENST00000482968 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 MAGEF1Q9HAY2 307 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 ZNF302Q9NR11 478 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 PCDHA5Q9Y5H7 936 aa16.79■□□□□ 0.28
PHGDH-205ENST00000482968 MYH9P35579 1960 aaKnown RBP16.79■□□□□ 0.28
PHGDH-205ENST00000482968 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
PHGDH-205ENST00000482968 EYA4O95677 639 aa16.78■□□□□ 0.28
PHGDH-205ENST00000482968 CYBAP13498 195 aa16.78■□□□□ 0.28
PHGDH-205ENST00000482968 UTP14CQ5TAP6 766 aaKnown RBP16.78■□□□□ 0.28
PHGDH-205ENST00000482968 EMID1Q96A84 441 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-205ENST00000482968 PCYT2Q99447 389 aa16.78■□□□□ 0.28
PHGDH-205ENST00000482968 NRBP1Q9UHY1 535 aa16.78■□□□□ 0.28
PHGDH-205ENST00000482968 GNEQ9Y223 722 aaKnown RBP16.78■□□□□ 0.28
PHGDH-205ENST00000482968 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-205ENST00000482968 ZNF862O60290 1169 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms