RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 TMEM119Q4V9L6 283 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 POTEBQ6S5H4 581 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 GPR142Q7Z601 462 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 GAS2L3Q86XJ1 694 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 KCTD17Q8N5Z5 321 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 GIMAP8Q8ND71 665 aaPredicted RBP13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 RAD54LQ92698 747 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 POLR3CQ9BUI4 534 aaPredicted RBP13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 DNAJC25Q9H1X3 360 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 TUBE1Q9UJT0 475 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 ZSWIM8A7E2V4 1837 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 FSD2A1L4K1 749 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 WDR64B1ANS9 1081 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 DKC1O60832 514 aaKnown RBP eCLIP13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 MED24O75448 989 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 RPN1P04843 607 aaKnown RBP13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 MUTP22033 750 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 ZNF165P49910 485 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 ASIC1P78348 528 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 MDM2Q00987 491 aaPredicted RBP13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 SPIRE1Q08AE8 756 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 MCM6Q14566 821 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 MTFR1Q15390 333 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 HYIQ5T013 277 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 ISM2Q6H9L7 571 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 KCNV1Q6PIU1 500 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 TPH2Q8IWU9 490 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 FAM200AQ8TCP9 573 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 DYDC2Q96IM9 177 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 PNMA5Q96PV4 448 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 FUCA2Q9BTY2 467 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 GTPBP4Q9BZE4 634 aaKnown RBP13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 RBSNQ9H1K0 784 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 MAN1B1Q9UKM7 699 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 PLXNB2O15031 1838 aa13.92□□□□□ -0.18
TSPAN1-208ENST00000482928 SLC15A5A6NIM6 579 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 SPATA31C2B4DYI2 1134 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 TLR2O60603 784 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 GJA8P48165 433 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 DPYDQ12882 1025 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 CRHR2Q13324 411 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 CUL4BQ13620 913 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 ZNF746Q6NUN9 644 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 CATSPER3Q86XQ3 398 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 SMAP1Q8IYB5 467 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 RDM1Q8NG50 284 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 NUDT12Q9BQG2 462 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 UBE2OQ9C0C9 1292 aaKnown RBP13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 JPH1Q9HDC5 661 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 EXOC1Q9NV70 894 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 SLC9A2Q9UBY0 812 aa13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-208ENST00000482928 NFASCO94856 1347 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 E9PMD0 336 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 EML1O00423 815 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 PSAPP07602 524 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 PLA2G4BP0C869 781 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 EDNRBP24530 442 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 ICAM3P32942 547 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 SP4Q02446 784 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 SEMA3FQ13275 785 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 STIM1Q13586 685 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 NEDD9Q14511 834 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 MIS18BP1Q6P0N0 1132 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 EEPD1Q7L9B9 569 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 GPBP1Q86WP2 473 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 MLKLQ8NB16 471 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 ADAMTS19Q8TE59 1207 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 NACC1Q96RE7 527 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 C7orf25Q9BPX7 421 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 LXNQ9BS40 222 aa13.9□□□□□ -0.18
TSPAN1-208ENST00000482928 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 TNPO2O14787 897 aaKnown RBP13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 TGFB3P10600 412 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 IDEP14735 1019 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 CASP1P29466 404 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 MAGEA10P43363 369 aaPredicted RBP13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 GRB14Q14449 540 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 DPCR1Q3MIW9 517 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 NT5DC1Q5TFE4 455 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 ZNF467Q7Z7K2 595 aaPredicted RBP13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 BANK1Q8NDB2 785 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 ATP6V0A1Q93050 837 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 TRIM9Q9C026 710 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 ZSWIM4Q9H7M6 989 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 BLOC1S4Q9NUP1 217 aa13.89□□□□□ -0.19
TSPAN1-208ENST00000482928 RGL1Q9NZL6 768 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms