RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CHMP2AO43633 222 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 PDCP20941 246 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 TRAPPC10P48553 1259 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 BFSP2Q13515 415 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 MFSD5Q6N075 450 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 POTEDQ86YR6 584 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 SLFN12Q8IYM2 578 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 RDM1Q8NG50 284 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 PPP1R12CQ9BZL4 782 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 UNC45AQ9H3U1 944 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 SETD4Q9NVD3 440 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 PCDH10Q9P2E7 1040 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 RANBP2P49792 3224 aaKnown RBP23.59■■□□□ 1.37
SEC13-217ENST00000482647 NEMFO60524 1076 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 HOXC8P31273 242 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 CYP2C18P33260 490 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 BMP8BP34820 402 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 PPFIA1Q13136 1202 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 PTK7Q13308 1070 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 CALCRLQ16602 461 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 PDXDC2PQ6P474 469 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 CCDC60Q8IWA6 550 aaPredicted RBP23.59■■□□□ 1.37
SEC13-217ENST00000482647 TMEM199Q8N511 208 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 CCDC155Q8N6L0 562 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 RETREG2Q8NC44 543 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 HAS1Q92839 578 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 ATP6V0A1Q93050 837 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 CTAGE1Q96RT6 745 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 TRPC6Q9Y210 931 aa23.59■■□□□ 1.37
SEC13-217ENST00000482647 COLQQ9Y215 455 aaPredicted RBP23.59■■□□□ 1.37
SEC13-217ENST00000482647 DOCK5Q9H7D0 1870 aa23.58■■□□□ 1.37
SEC13-217ENST00000482647 ZNF200P98182 395 aaPredicted RBP23.58■■□□□ 1.37
SEC13-217ENST00000482647 ORC2Q13416 577 aaPredicted RBP23.58■■□□□ 1.37
SEC13-217ENST00000482647 HIC1Q14526 733 aa23.58■■□□□ 1.37
SEC13-217ENST00000482647 MIER3Q7Z3K6 550 aa23.58■■□□□ 1.37
SEC13-217ENST00000482647 UBE2OQ9C0C9 1292 aaKnown RBP23.58■■□□□ 1.37
SEC13-217ENST00000482647 GABBR1Q9UBS5 961 aa23.58■■□□□ 1.37
SEC13-217ENST00000482647 MAFBQ9Y5Q3 323 aaPredicted RBP23.58■■□□□ 1.37
SEC13-217ENST00000482647 POTEB3A0JP26 581 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 PITPNM1O00562 1244 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 MCM7P33993 719 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 FPGSQ05932 587 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 PPP2R5CQ13362 524 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 PLCB4Q15147 1175 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 POTEBQ6S5H4 581 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 B3GNT9Q6UX72 402 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 SERINC5Q86VE9 423 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 CKAP2LQ8IYA6 745 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 CAGE1Q8TC20 777 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 LMBR1Q8WVP7 490 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 PRO3102Q9H379 93 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 VAV3Q9UKW4 847 aa23.57■■□□□ 1.36
SEC13-217ENST00000482647 RRN3P2A6NIE6 340 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 WNT7AO00755 349 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 TREHO43280 583 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 INSRRP14616 1297 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 ZNF174Q15697 407 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 GRIK4Q16099 956 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 TTC38Q5R3I4 469 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 ATP8B4Q8TF62 1192 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 FOXD4L1Q9NU39 408 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 UMODL1Q5DID0 1318 aa23.56■■□□□ 1.36
SEC13-217ENST00000482647 HSP90AA1P07900 732 aaKnown RBP23.55■■□□□ 1.36
SEC13-217ENST00000482647 CCL23P55773 120 aa23.55■■□□□ 1.36
SEC13-217ENST00000482647 MTMR9Q96QG7 549 aa23.55■■□□□ 1.36
SEC13-217ENST00000482647 PCDHA12Q9UN75 941 aa23.55■■□□□ 1.36
SEC13-217ENST00000482647 HBP1O60381 514 aa23.54■■□□□ 1.36
SEC13-217ENST00000482647 IGBP1P78318 339 aa23.54■■□□□ 1.36
SEC13-217ENST00000482647 ADAM17P78536 824 aa23.54■■□□□ 1.36
SEC13-217ENST00000482647 PPIGQ13427 754 aaKnown RBP eCLIP23.54■■□□□ 1.36
SEC13-217ENST00000482647 BBXQ8WY36 941 aaPredicted RBP23.54■■□□□ 1.36
SEC13-217ENST00000482647 DHX38Q92620 1227 aaKnown RBP23.54■■□□□ 1.36
SEC13-217ENST00000482647 WNT8AQ9H1J5 351 aa23.54■■□□□ 1.36
SEC13-217ENST00000482647 CSF2RAP15509 400 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 ATP4AP20648 1035 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 TXKP42681 527 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
SEC13-217ENST00000482647 RBL2Q08999 1139 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 RILPL1Q5EBL4 403 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 TAF2Q6P1X5 1199 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 FAM167AQ96KS9 214 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 TTC12Q9H892 705 aaPredicted RBP23.53■■□□□ 1.36
SEC13-217ENST00000482647 NRBP2Q9NSY0 501 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 TUBE1Q9UJT0 475 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 IGSF9BQ9UPX0 1349 aa23.53■■□□□ 1.36
SEC13-217ENST00000482647 A0A1W2PPC1 479 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 MBLAC1A4D2B0 266 aaPredicted RBP23.52■■□□□ 1.36
SEC13-217ENST00000482647 VPS37CA5D8V6 355 aaPredicted RBP23.52■■□□□ 1.36
SEC13-217ENST00000482647 EML1O00423 815 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 IQCF3P0C7M6 154 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 CKBP12277 381 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 SELPP16109 830 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 SYT1P21579 422 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 THPOP40225 353 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 TRIM71Q2Q1W2 868 aaKnown RBP23.52■■□□□ 1.36
SEC13-217ENST00000482647 ZNF484Q5JVG2 852 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 MARCH8Q5T0T0 291 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 RPUSD2Q8IZ73 545 aaKnown RBP23.52■■□□□ 1.36
SEC13-217ENST00000482647 TMEM60Q9H2L4 133 aa23.52■■□□□ 1.36
SEC13-217ENST00000482647 RFC2P35250 354 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms