RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CDC25AP30304 524 aa13□□□□□ -0.33
HPS4-212ENST00000481910 SFNP31947 248 aa13□□□□□ -0.33
HPS4-212ENST00000481910 LONP1P36776 959 aaKnown RBP13□□□□□ -0.33
HPS4-212ENST00000481910 JAK3P52333 1124 aa13□□□□□ -0.33
HPS4-212ENST00000481910 SPECC1Q5M775 1068 aa13□□□□□ -0.33
HPS4-212ENST00000481910 PPTC7Q8NI37 304 aa13□□□□□ -0.33
HPS4-212ENST00000481910 AFG1LQ8WV93 481 aa13□□□□□ -0.33
HPS4-212ENST00000481910 SEPT1Q8WYJ6 367 aa13□□□□□ -0.33
HPS4-212ENST00000481910 GPR20Q99678 358 aa13□□□□□ -0.33
HPS4-212ENST00000481910 SPC25Q9HBM1 224 aa13□□□□□ -0.33
HPS4-212ENST00000481910 XPNPEP3Q9NQH7 507 aa13□□□□□ -0.33
HPS4-212ENST00000481910 GOLGA6L4A6NEF3 574 aa13□□□□□ -0.33
HPS4-212ENST00000481910 PGK1P00558 417 aa13□□□□□ -0.33
HPS4-212ENST00000481910 C6orf222P0C671 652 aaPredicted RBP13□□□□□ -0.33
HPS4-212ENST00000481910 TCF7P36402 384 aaPredicted RBP13□□□□□ -0.33
HPS4-212ENST00000481910 MIS18BP1Q6P0N0 1132 aa13□□□□□ -0.33
HPS4-212ENST00000481910 ERMNQ8TAM6 284 aa13□□□□□ -0.33
HPS4-212ENST00000481910 KCNV2Q8TDN2 545 aa13□□□□□ -0.33
HPS4-212ENST00000481910 ARMC5Q96C12 935 aa13□□□□□ -0.33
HPS4-212ENST00000481910 ZNF333Q96JL9 665 aa13□□□□□ -0.33
HPS4-212ENST00000481910 AK8Q96MA6 479 aa13□□□□□ -0.33
HPS4-212ENST00000481910 PCDHA10Q9Y5I2 948 aa13□□□□□ -0.33
HPS4-212ENST00000481910 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 GSTTP1A0A1W2PQM5 241 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 A6NJR5 290 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 PP2D1A8MPX8 630 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 PSAPP07602 524 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 GJA9P57773 515 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 IRX5P78411 483 aaPredicted RBP12.99□□□□□ -0.33
HPS4-212ENST00000481910 BRDTQ58F21 947 aaPredicted RBP12.99□□□□□ -0.33
HPS4-212ENST00000481910 LHX8Q68G74 356 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 ADALQ6DHV7 355 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 POTEHQ6S545 545 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
HPS4-212ENST00000481910 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
HPS4-212ENST00000481910 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
HPS4-212ENST00000481910 PPFIA4O75335 1185 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 PRPF40AO75400 957 aaKnown RBP12.98□□□□□ -0.33
HPS4-212ENST00000481910 ATG7O95352 703 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 MMP3P08254 477 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 UBA7P41226 1012 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 CPT1AP50416 773 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 BEX3Q00994 111 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 EPHA7Q15375 998 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 FSCN1Q16658 493 aaKnown RBP12.98□□□□□ -0.33
HPS4-212ENST00000481910 DGKDQ16760 1214 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 GNASQ5JWF2 1037 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 KRT79Q5XKE5 535 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 EPSTI1Q96J88 318 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
HPS4-212ENST00000481910 GOLGA6L22H0YM25 854 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 BACH1O14867 736 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 HAUS3Q68CZ6 603 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 USP49Q70CQ1 688 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 SNX29Q8TEQ0 813 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
HPS4-212ENST00000481910 UPF3AQ9H1J1 476 aaKnown RBP12.98□□□□□ -0.33
HPS4-212ENST00000481910 AZI2Q9H6S1 392 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 RGL1Q9NZL6 768 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
HPS4-212ENST00000481910 MYH9P35579 1960 aaKnown RBP12.97□□□□□ -0.33
HPS4-212ENST00000481910 MYADML2A6NDP7 307 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 CTAGE5O15320 804 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 ADAMTS4O75173 837 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 P4HBP07237 508 aaKnown RBP12.97□□□□□ -0.33
HPS4-212ENST00000481910 CCT6AP40227 531 aaKnown RBP12.97□□□□□ -0.33
HPS4-212ENST00000481910 ZRSR1Q15695 479 aaKnown RBP12.97□□□□□ -0.33
HPS4-212ENST00000481910 RNF180Q86T96 592 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 CCDC60Q8IWA6 550 aaPredicted RBP12.97□□□□□ -0.33
HPS4-212ENST00000481910 TPH2Q8IWU9 490 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 OTUD6BQ8N6M0 293 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 TMEM87AQ8NBN3 555 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 BANK1Q8NDB2 785 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 RASSF8Q8NHQ8 419 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 GLG1Q92896 1179 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 DYDC2Q96IM9 177 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 HSD17B14Q9BPX1 270 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 ZNF302Q9NR11 478 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 GABBR1Q9UBS5 961 aa12.97□□□□□ -0.33
HPS4-212ENST00000481910 WDR81Q562E7 1941 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 HTTP42858 3142 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 IGKV6D-21A0A0A0MT36 114 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 ZEB2O60315 1214 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 SLITRK3O94933 977 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 CMA1P23946 247 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 RPA1P27694 616 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 TXLNAP40222 546 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 STAT5BP51692 787 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 NKX3-2P78367 333 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
HPS4-212ENST00000481910 FAM160B1Q5W0V3 765 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 TRMT1LQ7Z2T5 733 aaKnown RBP12.96□□□□□ -0.33
HPS4-212ENST00000481910 CABP7Q86V35 215 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms