RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 TMEM192Q8IY95 271 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 CRIPAKQ8N1N5 446 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 KCNB2Q92953 911 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 CLP1Q92989 425 aaKnown RBP13.24□□□□□ -0.29
GARNL3-217ENST00000481875 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
GARNL3-217ENST00000481875 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
GARNL3-217ENST00000481875 ERAP1Q9NZ08 941 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 ATG2AQ2TAZ0 1938 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 GSTTP1A0A1W2PQM5 241 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 SORBS3O60504 671 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 PSMA5P28066 241 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 TCF7P36402 384 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-217ENST00000481875 PLA2G5P39877 138 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 MGAT3Q09327 533 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 MARCH8Q5T0T0 291 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 FAM117BQ6P1L5 589 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 TRIM50Q86XT4 487 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 FANCBQ8NB91 859 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-217ENST00000481875 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 SMARCAD1Q9H4L7 1026 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 EPHX3Q9H6B9 360 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 JADE2Q9NQC1 790 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 RWDD3Q9Y3V2 267 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 TELO2Q9Y4R8 837 aa13.23□□□□□ -0.29
GARNL3-217ENST00000481875 GRXCR2A6NFK2 248 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 RRN3P2A6NIE6 340 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 PLEKHA8P1O95397 391 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 ANAPC15P60006 121 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 ARHGAP4P98171 946 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 MTMR1Q13613 665 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 RSPH3Q86UC2 560 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 BANK1Q8NDB2 785 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 TNPO1Q92973 898 aaKnown RBP13.22□□□□□ -0.29
GARNL3-217ENST00000481875 ZNF689Q96CS4 500 aaPredicted RBP13.22□□□□□ -0.29
GARNL3-217ENST00000481875 PABPC5Q96DU9 382 aaKnown RBP13.22□□□□□ -0.29
GARNL3-217ENST00000481875 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 JAKMIP1Q96N16 626 aaKnown RBP13.22□□□□□ -0.29
GARNL3-217ENST00000481875 NEK1Q96PY6 1258 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 LRFN3Q9BTN0 628 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 MYL10Q9BUA6 226 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
GARNL3-217ENST00000481875 NFASCO94856 1347 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 SPDYE3A6NKU9 549 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 STK25O00506 426 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 ENPP3O14638 875 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 CTSHP09668 335 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 BMPR1AP36894 532 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 PPFIA1Q13136 1202 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 GPM6BQ13491 265 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 LPIN1Q14693 890 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 TMEM31Q5JXX7 168 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 FBXO47Q5MNV8 452 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 UTP14CQ5TAP6 766 aaKnown RBP13.21□□□□□ -0.29
GARNL3-217ENST00000481875 TMTC3Q6ZXV5 915 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 PLPPR4Q7Z2D5 763 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 CD320Q9NPF0 282 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 C11orf16Q9NQ32 467 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 SLC12A7Q9Y666 1083 aa13.21□□□□□ -0.29
GARNL3-217ENST00000481875 KDM3AQ9Y4C1 1321 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 ATG7O95352 703 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 FOSP01100 380 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 PYGBP11216 843 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 KCNA5P22460 613 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 SLC26A2P50443 739 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 RCAN1P53805 252 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 FUT2Q10981 343 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 GRIK4Q16099 956 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 ADCK5Q3MIX3 580 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 RUFY4Q6ZNE9 571 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 GJD3Q8N144 294 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 FIBCD1Q8N539 461 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 PIBF1Q8WXW3 757 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 PCYT2Q99447 389 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 C11orf84Q9BUA3 381 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 PLVAPQ9BX97 442 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 FTHL17Q9BXU8 183 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 GLT8D2Q9H1C3 349 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 JPH1Q9HDC5 661 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 KCNH7Q9NS40 1196 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 PCDHA6Q9UN73 950 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-217ENST00000481875 PCDHA8Q9Y5H6 950 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms