RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ARL13BQ3SXY8 428 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ZNF667Q5HYK9 610 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 PRR5LQ6MZQ0 368 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 DNAJC24Q6P3W2 148 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 CEP95Q96GE4 821 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ANAPC5Q9UJX4 755 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 PPP2R2CQ9Y2T4 447 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 TACC3Q9Y6A5 838 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 H7C0C1 242 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ATF2P15336 505 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 HPDP32754 393 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ATP5OP48047 213 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ARHGAP4P98171 946 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ITKQ08881 620 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ANKRD20A3Q5VUR7 823 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 BSPRYQ5W0U4 402 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 DSTYKQ6XUX3 929 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 PPP4R1Q8TF05 950 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 CFAP57Q96MR6 1250 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 SLC38A10Q9HBR0 1119 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 EFCAB8A8MWE9 144 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 NDUFAB1O14561 156 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 WDR46O15213 610 aaKnown RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 RGS16O15492 202 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 MAPK4P31152 587 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 QARSP47897 775 aaKnown RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 CLNS1AP54105 237 aaKnown RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 HDLBPQ00341 1268 aaKnown RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 SBK1Q52WX2 424 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 ZNF653Q96CK0 615 aa10.25□□□□□ -0.77
GARNL3-216ENST00000481242 GPR101Q96P66 508 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 KDM6AO15550 1401 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-216ENST00000481242 CLDN3O15551 220 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 SLC26A4O43511 780 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 TROVE2P10155 538 aaKnown RBP eCLIP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 HOXA13P31271 388 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 IFRD2Q12894 506 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 NFX1Q12986 1120 aaKnown RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 Q3C1V9 767 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 RPUSD2Q8IZ73 545 aaKnown RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 MB21D1Q8N884 522 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 TIPINQ9BVW5 301 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 ALDH8A1Q9H2A2 487 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 SCINQ9Y6U3 715 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 CDC42BPBQ9Y5S2 1711 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 KIAA0391O15091 583 aaKnown RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 CACNB3P54284 484 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 COG2Q14746 738 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 SH2D4BQ5SQS7 431 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 CLEC17AQ6ZS10 378 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 NDUFAF2Q8N183 169 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 ENAHQ8N8S7 591 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 NLRP4Q96MN2 994 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 RAB3IPQ96QF0 476 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 ZBED2Q9BTP6 218 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 ESYT2A0FGR8 921 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 MYL3P08590 195 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 RASSF2P50749 326 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 AP3M2P53677 418 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 IRX1P78414 480 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 FOXO4P98177 505 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 RESTQ13127 1097 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 PGBD1Q96JS3 809 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 PSMB7Q99436 277 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 MMP19Q99542 508 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 GCNT4Q9P109 453 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 PRDM4Q9UKN5 801 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 CAMTA2O94983 1202 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 SRGAP2CP0DJJ0 459 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 C12orf60Q5U649 245 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 PNMA8AQ86V59 439 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 C17orf53Q8N3J3 647 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 TEX13BQ9BXU2 312 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 RAVER2Q9HCJ3 691 aaKnown RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 BARHL2Q9NY43 387 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 NXF1Q9UBU9 619 aaKnown RBP10.24□□□□□ -0.77
GARNL3-216ENST00000481242 HACL1Q9UJ83 578 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 SERPINA10Q9UK55 444 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 ARHGEF40Q8TER5 1519 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 DCCP43146 1447 aa10.24□□□□□ -0.77
GARNL3-216ENST00000481242 PSMC5P62195 406 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 NAA25Q14CX7 972 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 RPS6KA2Q15349 733 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 TSGA10IPQ3SY00 556 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 VSIG1Q86XK7 387 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 SPZ1Q9BXG8 430 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 FAM49AQ9H0Q0 323 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-216ENST00000481242 NYAP2Q9P242 653 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 CNOT7Q9UIV1 285 aaKnown RBP10.23□□□□□ -0.77
GARNL3-216ENST00000481242 MADDQ8WXG6 1647 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 GOLGA8QA0A0J9YX86 632 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 GOLGA8OA6NCC3 632 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 GOLGA8NF8WBI6 632 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 MEIS1O00470 390 aa10.23□□□□□ -0.77
GARNL3-216ENST00000481242 MCF2LO15068 1137 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms