RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 CCDC60Q8IWA6 550 aaPredicted RBP17.58■□□□□ 0.4
CNKSR1-206ENST00000481077 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.4
CNKSR1-206ENST00000481077 AFAP1L1Q8TED9 768 aa17.58■□□□□ 0.4
CNKSR1-206ENST00000481077 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
CNKSR1-206ENST00000481077 RNPEPQ9H4A4 650 aa17.58■□□□□ 0.4
CNKSR1-206ENST00000481077 VAV3Q9UKW4 847 aa17.58■□□□□ 0.4
CNKSR1-206ENST00000481077 PCDHA12Q9UN75 941 aa17.58■□□□□ 0.4
CNKSR1-206ENST00000481077 STX6O43752 255 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 GNAT1P11488 350 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 PDIA4P13667 645 aaKnown RBP17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 NBR1Q14596 966 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 GDF6Q6KF10 455 aaPredicted RBP17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 B3GNT9Q6UX72 402 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 SH3RF1Q7Z6J0 888 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 MTMR9Q96QG7 549 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 GABBR1Q9UBS5 961 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 TRPC6Q9Y210 931 aa17.57■□□□□ 0.4
CNKSR1-206ENST00000481077 NRCAMQ92823 1304 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 C17orf102A2RUQ5 167 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 KIAA0355O15063 1070 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 RAG1P15918 1043 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 TXKP42681 527 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 CKAP2LQ8IYA6 745 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 TMEM60Q9H2L4 133 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 TTC12Q9H892 705 aaPredicted RBP17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 TBX21Q9UL17 535 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 PCDHB6Q9Y5E3 794 aa17.56■□□□□ 0.4
CNKSR1-206ENST00000481077 POTEB3A0JP26 581 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 TRIM43BA6NCK2 446 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 PPFIA1Q13136 1202 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 PLCB4Q15147 1175 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 POTEBQ6S5H4 581 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 ATP6V0A1Q93050 837 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 TRIM43Q96BQ3 446 aaPredicted RBP17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 LBHD1Q9BQE6 289 aaPredicted RBP17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 SETD4Q9NVD3 440 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 MTMR6Q9Y217 621 aa17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 MAFBQ9Y5Q3 323 aaPredicted RBP17.55■□□□□ 0.4
CNKSR1-206ENST00000481077 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 EML1O00423 815 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 CYP2C9P11712 490 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 HOXC8P31273 242 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 PTGDRQ13258 359 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 GRIK4Q16099 956 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 NCAPH2Q6IBW4 605 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 ATP8B4Q8TF62 1192 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 LMBR1Q8WVP7 490 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
CNKSR1-206ENST00000481077 RRN3P2A6NIE6 340 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 LAD1O00515 517 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 HBP1O60381 514 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 TIMP1P01033 207 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 INSRRP14616 1297 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 ZNF200P98182 395 aaPredicted RBP17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 SPIRE1Q08AE8 756 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 RESTQ13127 1097 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 BFSP2Q13515 415 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 HIC1Q14526 733 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 EPHA7Q15375 998 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 PRPF38BQ5VTL8 546 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 TRMT1LQ7Z2T5 733 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 CCDC155Q8N6L0 562 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 FAM167AQ96KS9 214 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 PPP1R12CQ9BZL4 782 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 PDE4DIPQ5VU43 2346 aa17.53■□□□□ 0.4
CNKSR1-206ENST00000481077 TREHO43280 583 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 DKC1O60832 514 aaKnown RBP eCLIP17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 P4HBP07237 508 aaKnown RBP17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 ATP4AP20648 1035 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 TECP42680 631 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 PSMC5P62195 406 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 IGBP1P78318 339 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 PRKCEQ02156 737 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 PTK7Q13308 1070 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 UGCGQ16739 394 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 SERINC5Q86VE9 423 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 BANK1Q8NDB2 785 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 CTAGE1Q96RT6 745 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 NOC4LQ9BVI4 516 aaKnown RBP17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 NRBP2Q9NSY0 501 aa17.52■□□□□ 0.4
CNKSR1-206ENST00000481077 PITPNM1O00562 1244 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 ZNF862O60290 1169 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 OATP04181 439 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 ITGB8P26012 769 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 CYP2C18P33260 490 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 MAGEA10P43363 369 aaPredicted RBP17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 QARSP47897 775 aaKnown RBP17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 ADAM17P78536 824 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 ZNF484Q5JVG2 852 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 CAGE1Q8TC20 777 aa17.51■□□□□ 0.39
CNKSR1-206ENST00000481077 BADQ92934 168 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms