RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 FOSP01100 380 aaPredicted RBP17.41■□□□□ 0.38
LIMS3-203ENST00000480744 HMGB1P09429 215 aaKnown RBP17.41■□□□□ 0.38
LIMS3-203ENST00000480744 ARP10275 920 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 BMP1P13497 986 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 CDC27P30260 824 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 ZNF76P36508 570 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 ZNF713Q8N859 430 aaPredicted RBP17.41■□□□□ 0.38
LIMS3-203ENST00000480744 DNAJB3Q8WWF6 145 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 TOP1MTQ969P6 601 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 ZBTB10Q96DT7 871 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
LIMS3-203ENST00000480744 FAM49AQ9H0Q0 323 aaPredicted RBP17.41■□□□□ 0.38
LIMS3-203ENST00000480744 BARHL2Q9NY43 387 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 LMCD1Q9NZU5 365 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 TRPC6Q9Y210 931 aa17.41■□□□□ 0.38
LIMS3-203ENST00000480744 CENPBP07199 599 aaPredicted RBP17.4■□□□□ 0.38
LIMS3-203ENST00000480744 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
LIMS3-203ENST00000480744 APOBRQ0VD83 1088 aa17.4■□□□□ 0.38
LIMS3-203ENST00000480744 CEP55Q53EZ4 464 aa17.4■□□□□ 0.38
LIMS3-203ENST00000480744 Q6ZUG5 572 aa17.4■□□□□ 0.38
LIMS3-203ENST00000480744 SP7Q8TDD2 431 aaPredicted RBP17.4■□□□□ 0.38
LIMS3-203ENST00000480744 PCYT2Q99447 389 aa17.4■□□□□ 0.38
LIMS3-203ENST00000480744 FAM217BQ9NTX9 383 aaPredicted RBP17.4■□□□□ 0.38
LIMS3-203ENST00000480744 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
LIMS3-203ENST00000480744 EVPLQ92817 2033 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 DDX39AO00148 427 aaKnown RBP17.39■□□□□ 0.37
LIMS3-203ENST00000480744 INSRRP14616 1297 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 ADD1P35611 737 aaKnown RBP17.39■□□□□ 0.37
LIMS3-203ENST00000480744 ACTR2P61160 394 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 AP3B2Q13367 1082 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 LPIN1Q14693 890 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 MARCH8Q5T0T0 291 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 JAKMIP3Q5VZ66 844 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 RPAINQ86UA6 219 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 BRF1Q92994 677 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 GLT8D2Q9H1C3 349 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 AGO4Q9HCK5 861 aaKnown RBP17.39■□□□□ 0.37
LIMS3-203ENST00000480744 CDY2AQ9Y6F7 541 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 NFASCO94856 1347 aa17.39■□□□□ 0.37
LIMS3-203ENST00000480744 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 MBLAC1A4D2B0 266 aaPredicted RBP17.38■□□□□ 0.37
LIMS3-203ENST00000480744 RRN3P2A6NIE6 340 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 SREBF1P36956 1147 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 RCAN1P53805 252 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 MRPS6P82932 125 aaKnown RBP17.38■□□□□ 0.37
LIMS3-203ENST00000480744 MGAT3Q09327 533 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 ITGB3BPQ13352 177 aaPredicted RBP17.38■□□□□ 0.37
LIMS3-203ENST00000480744 PLCB4Q15147 1175 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 EPC2Q52LR7 807 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 TEX2Q8IWB9 1127 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 TRAPPC12Q8WVT3 735 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 CCDC136Q96JN2 1154 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 SAMD11Q96NU1 681 aa17.38■□□□□ 0.37
LIMS3-203ENST00000480744 BDP1A6H8Y1 2624 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 WDR81Q562E7 1941 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 XIRP2A4UGR9 3374 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 MEIS1O00470 390 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 SCG2P13521 617 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 CLK2P49760 499 aaKnown RBP17.37■□□□□ 0.37
LIMS3-203ENST00000480744 STAT5BP51692 787 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 TMEM62Q0P6H9 643 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 GPM6BQ13491 265 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 PFKFB3Q16875 520 aaPredicted RBP17.37■□□□□ 0.37
LIMS3-203ENST00000480744 FBXO47Q5MNV8 452 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 PLA2G4DQ86XP0 818 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 TMEM192Q8IY95 271 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 TNPO1Q92973 898 aaKnown RBP17.37■□□□□ 0.37
LIMS3-203ENST00000480744 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 UIMC1Q96RL1 719 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 SNX14Q9Y5W7 946 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 TTC3P53804 2025 aa17.37■□□□□ 0.37
LIMS3-203ENST00000480744 COL4A6Q14031 1691 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 M0QZ92 97 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 BACH1O14867 736 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 HSPA4P34932 840 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 PTPROQ16827 1216 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 IER5Q5VY09 327 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 TSHZ1Q6ZSZ6 1077 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 PLPPR4Q7Z2D5 763 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 FIBCD1Q8N539 461 aa17.36■□□□□ 0.37
LIMS3-203ENST00000480744 KIAA1671Q9BY89 1806 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 POTEB3A0JP26 581 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 PPFIA3O75145 1194 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 CD52P31358 61 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 CTNNB1P35222 781 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 AKAP17AQ02040 695 aaKnown RBP17.35■□□□□ 0.37
LIMS3-203ENST00000480744 POTEBQ6S5H4 581 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 CCDC12Q8WUD4 166 aaPredicted RBP17.35■□□□□ 0.37
LIMS3-203ENST00000480744 KCNB2Q92953 911 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 PHKBQ93100 1093 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 MRPL38Q96DV4 380 aaKnown RBP17.35■□□□□ 0.37
LIMS3-203ENST00000480744 UBE2ZQ9H832 354 aaPredicted RBP17.35■□□□□ 0.37
LIMS3-203ENST00000480744 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 TRPV2Q9Y5S1 764 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 MUC3AQ02505 3323 aa17.35■□□□□ 0.37
LIMS3-203ENST00000480744 FAM86B1E9PN63 330 aa17.34■□□□□ 0.37
LIMS3-203ENST00000480744 H3BNC9 293 aa17.34■□□□□ 0.37
LIMS3-203ENST00000480744 ENPP3O14638 875 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms