RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 BEGAINQ9BUH8 593 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 KBTBD4Q9NVX7 518 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 KIAA1468Q9P260 1216 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 DNM3Q9UQ16 869 aa19.67■□□□□ 0.74
UPF3A-206ENST00000480362 ATG7O95352 703 aa19.66■□□□□ 0.74
UPF3A-206ENST00000480362 ZNF445P59923 1031 aa19.66■□□□□ 0.74
UPF3A-206ENST00000480362 DHX8Q14562 1220 aaKnown RBP19.66■□□□□ 0.74
UPF3A-206ENST00000480362 MIS18BP1Q6P0N0 1132 aa19.66■□□□□ 0.74
UPF3A-206ENST00000480362 METTL7BQ6UX53 244 aa19.66■□□□□ 0.74
UPF3A-206ENST00000480362 ERO1AQ96HE7 468 aa19.66■□□□□ 0.74
UPF3A-206ENST00000480362 LXNQ9BS40 222 aa19.66■□□□□ 0.74
UPF3A-206ENST00000480362 ZSWIM4Q9H7M6 989 aa19.66■□□□□ 0.74
UPF3A-206ENST00000480362 WRAP73Q9P2S5 460 aaPredicted RBP19.66■□□□□ 0.74
UPF3A-206ENST00000480362 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-206ENST00000480362 GSTTP1A0A1W2PQM5 241 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 GTPBP6O43824 516 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-206ENST00000480362 SUPT20HL2P0C7V6 817 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 CASP1P29466 404 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 QARSP47897 775 aaKnown RBP19.65■□□□□ 0.74
UPF3A-206ENST00000480362 CCDC144BQ3MJ40 725 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 SWSAP1Q6NVH7 229 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 ZNF296Q8WUU4 475 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-206ENST00000480362 NACC1Q96RE7 527 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 BLZF1Q9H2G9 400 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 GABBR1Q9UBS5 961 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 SRRDQ9UH36 339 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 PCDHA5Q9Y5H7 936 aa19.65■□□□□ 0.74
UPF3A-206ENST00000480362 EYA4O95677 639 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 GH1P01241 217 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 SSBP05455 408 aaKnown RBP eCLIP19.64■□□□□ 0.73
UPF3A-206ENST00000480362 PLA2G4BP0C869 781 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 ZNF865P0CJ78 1059 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-206ENST00000480362 SMPD1P17405 629 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 PTGS1P23219 599 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 PSMC5P62195 406 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 AMPD3Q01432 767 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 DPYDQ12882 1025 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 IRF5Q13568 498 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 CUL4BQ13620 913 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 UGCGQ16739 394 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 GJC2Q5T442 439 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-206ENST00000480362 SASS6Q6UVJ0 657 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 LRSAM1Q6UWE0 723 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 PIGOQ8TEQ8 1089 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 SEPT1Q8WYJ6 367 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 SPATA33Q96N06 139 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 TUBE1Q9UJT0 475 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 TSKSQ9UJT2 592 aa19.64■□□□□ 0.73
UPF3A-206ENST00000480362 BACH1O14867 736 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 ZBTB39O15060 712 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 SMC2O95347 1197 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 LYPLA2O95372 231 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 GNRH1P01148 92 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 TNFAIP2Q03169 654 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 ARHGAP1Q07960 439 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 LAMC2Q13753 1193 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 ARHGEF6Q15052 776 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 HSDL1Q3SXM5 330 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 DUSP28Q4G0W2 176 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 MFSD14CQ5VZR4 134 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 CCDC60Q8IWA6 550 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-206ENST00000480362 C4orf19Q8IY42 314 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 TRMT44Q8IYL2 757 aaKnown RBP19.63■□□□□ 0.73
UPF3A-206ENST00000480362 TRIB2Q92519 343 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 SMARCE1Q969G3 411 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 GPR20Q99678 358 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 C7orf25Q9BPX7 421 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 LRRC27Q9C0I9 530 aa19.63■□□□□ 0.73
UPF3A-206ENST00000480362 MYMKA6NI61 221 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 NOP56O00567 594 aaKnown RBP19.62■□□□□ 0.73
UPF3A-206ENST00000480362 NKRFO15226 690 aaKnown RBP eCLIP19.62■□□□□ 0.73
UPF3A-206ENST00000480362 DKC1O60832 514 aaKnown RBP eCLIP19.62■□□□□ 0.73
UPF3A-206ENST00000480362 MYL1P05976 194 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 SARSP49591 514 aaKnown RBP19.62■□□□□ 0.73
UPF3A-206ENST00000480362 SLC12A3P55017 1021 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 DNAJC5GQ8N7S2 189 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 SYT2Q8N9I0 419 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-206ENST00000480362 ATP6V0A1Q93050 837 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 FUCA2Q9BTY2 467 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 BHMT2Q9H2M3 363 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 ZNF302Q9NR11 478 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
UPF3A-206ENST00000480362 IGKV6D-21A0A0A0MT36 114 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 BIN1O00499 593 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 CCDC192P0DO97 292 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 XRCC6P12956 609 aaKnown RBP eCLIP19.61■□□□□ 0.73
UPF3A-206ENST00000480362 TCF7P36402 384 aaPredicted RBP19.61■□□□□ 0.73
UPF3A-206ENST00000480362 TYRO3Q06418 890 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 NT5DC1Q5TFE4 455 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 SPATA20Q8TB22 786 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 EMID1Q96A84 441 aaPredicted RBP19.61■□□□□ 0.73
UPF3A-206ENST00000480362 PCYT2Q99447 389 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 TRIM9Q9C026 710 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 NRBP1Q9UHY1 535 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 FAM184BQ9ULE4 1060 aa19.61■□□□□ 0.73
UPF3A-206ENST00000480362 ADCY6O43306 1168 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 ZNF862O60290 1169 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 RPN1P04843 607 aaKnown RBP19.6■□□□□ 0.73
UPF3A-206ENST00000480362 CYP11B2P19099 503 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 FAM160B1Q5W0V3 765 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms