RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 OR52Z1P0C646 297 aa28.17■■■□□ 2.1
PERM1-203ENST00000479361 MARK3P27448 753 aa28.17■■■□□ 2.1
PERM1-203ENST00000479361 TXKP42681 527 aa28.17■■■□□ 2.1
PERM1-203ENST00000479361 FAAP100Q0VG06 881 aa28.17■■■□□ 2.1
PERM1-203ENST00000479361 TMEM60Q9H2L4 133 aa28.17■■■□□ 2.1
PERM1-203ENST00000479361 TTC12Q9H892 705 aaPredicted RBP28.17■■■□□ 2.1
PERM1-203ENST00000479361 LAD1O00515 517 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 SMIM10L2AP0DMW4 78 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 SMIM10L2BP0DMW5 78 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 GNAT1P11488 350 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 PPP1R13LQ8WUF5 828 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 TRPV6Q9H1D0 765 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 RNPEPQ9H4A4 650 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 PRDM5Q9NQX1 630 aaPredicted RBP28.16■■■□□ 2.1
PERM1-203ENST00000479361 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.16■■■□□ 2.1
PERM1-203ENST00000479361 TMEM39AQ9NV64 488 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 NOD1Q9Y239 953 aa28.16■■■□□ 2.1
PERM1-203ENST00000479361 RESTQ13127 1097 aa28.15■■■□□ 2.1
PERM1-203ENST00000479361 PDLIM7Q9NR12 457 aa28.15■■■□□ 2.1
PERM1-203ENST00000479361 TRMT13Q9NUP7 481 aaKnown RBP28.15■■■□□ 2.1
PERM1-203ENST00000479361 GABBR1Q9UBS5 961 aa28.15■■■□□ 2.1
PERM1-203ENST00000479361 TRPC6Q9Y210 931 aa28.15■■■□□ 2.1
PERM1-203ENST00000479361 MAFBQ9Y5Q3 323 aaPredicted RBP28.15■■■□□ 2.1
PERM1-203ENST00000479361 C17orf102A2RUQ5 167 aa28.14■■■□□ 2.1
PERM1-203ENST00000479361 PTGDRQ13258 359 aa28.14■■■□□ 2.1
PERM1-203ENST00000479361 PTGISQ16647 500 aa28.14■■■□□ 2.1
PERM1-203ENST00000479361 GDF6Q6KF10 455 aaPredicted RBP28.14■■■□□ 2.1
PERM1-203ENST00000479361 CKAP2LQ8IYA6 745 aa28.14■■■□□ 2.1
PERM1-203ENST00000479361 ATP6V0A1Q93050 837 aa28.14■■■□□ 2.1
PERM1-203ENST00000479361 NRCAMQ92823 1304 aa28.14■■■□□ 2.09
PERM1-203ENST00000479361 POTEB3A0JP26 581 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 SPIRE1Q08AE8 756 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 PPFIA1Q13136 1202 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 TMEM266Q2M3C6 531 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 NCAPH2Q6IBW4 605 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 POTEBQ6S5H4 581 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 C4orf32Q8N8J7 132 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 FAM167AQ96KS9 214 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 IGSF9BQ9UPX0 1349 aa28.13■■■□□ 2.09
PERM1-203ENST00000479361 EML1O00423 815 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 KIAA0355O15063 1070 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 BMP15O95972 392 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 HOXC8P31273 242 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 PLCB4Q15147 1175 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 EPHA7Q15375 998 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 ATP8B4Q8TF62 1192 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 TBX21Q9UL17 535 aa28.12■■■□□ 2.09
PERM1-203ENST00000479361 RRN3P2A6NIE6 340 aa28.11■■■□□ 2.09
PERM1-203ENST00000479361 HBP1O60381 514 aa28.11■■■□□ 2.09
PERM1-203ENST00000479361 DKC1O60832 514 aaKnown RBP eCLIP28.11■■■□□ 2.09
PERM1-203ENST00000479361 ZSCAN22P10073 491 aaPredicted RBP28.11■■■□□ 2.09
PERM1-203ENST00000479361 PRPHP41219 470 aa28.11■■■□□ 2.09
PERM1-203ENST00000479361 SETD4Q9NVD3 440 aa28.11■■■□□ 2.09
PERM1-203ENST00000479361 ZMYND8Q9ULU4 1186 aaPredicted RBP28.11■■■□□ 2.09
PERM1-203ENST00000479361 CEP131Q9UPN4 1083 aa28.11■■■□□ 2.09
PERM1-203ENST00000479361 P4HBP07237 508 aaKnown RBP28.1■■■□□ 2.09
PERM1-203ENST00000479361 ANP32AP39687 249 aaKnown RBP28.1■■■□□ 2.09
PERM1-203ENST00000479361 SH3RF1Q7Z6J0 888 aa28.1■■■□□ 2.09
PERM1-203ENST00000479361 LMBR1Q8WVP7 490 aa28.1■■■□□ 2.09
PERM1-203ENST00000479361 BBXQ8WY36 941 aaPredicted RBP28.1■■■□□ 2.09
PERM1-203ENST00000479361 RAB34Q9BZG1 259 aa28.1■■■□□ 2.09
PERM1-203ENST00000479361 PDE4DIPQ5VU43 2346 aa28.1■■■□□ 2.09
PERM1-203ENST00000479361 TRIM43BA6NCK2 446 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 H0YGN5 161 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 INSRRP14616 1297 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 RAG1P15918 1043 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 SYN1P17600 705 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 TECP42680 631 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 QARSP47897 775 aaKnown RBP28.09■■■□□ 2.09
PERM1-203ENST00000479361 FXR2P51116 673 aaKnown RBP eCLIP28.09■■■□□ 2.09
PERM1-203ENST00000479361 PSMC5P62195 406 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 ATP2C1P98194 919 aaPredicted RBP28.09■■■□□ 2.09
PERM1-203ENST00000479361 GRIK4Q16099 956 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 NEK9Q8TD19 979 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 TRIM43Q96BQ3 446 aaPredicted RBP28.09■■■□□ 2.09
PERM1-203ENST00000479361 NRBP2Q9NSY0 501 aa28.09■■■□□ 2.09
PERM1-203ENST00000479361 CYP2C9P11712 490 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 ATP4AP20648 1035 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 PRKCEQ02156 737 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 PTK7Q13308 1070 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 UGCGQ16739 394 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 DTHD1Q6ZMT9 781 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 CCDC155Q8N6L0 562 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 BANK1Q8NDB2 785 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 HIPK3Q9H422 1215 aa28.08■■■□□ 2.09
PERM1-203ENST00000479361 POTEMA6NI47 508 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 ZNF862O60290 1169 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 OATP04181 439 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 ZNF200P98182 395 aaPredicted RBP28.07■■■□□ 2.08
PERM1-203ENST00000479361 BFSP2Q13515 415 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 HIC1Q14526 733 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 ZNF484Q5JVG2 852 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 ARL6IP4Q66PJ3 421 aaKnown RBP28.07■■■□□ 2.08
PERM1-203ENST00000479361 ERMNQ8TAM6 284 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 LBHD1Q9BQE6 289 aaPredicted RBP28.07■■■□□ 2.08
PERM1-203ENST00000479361 EIF2AK1Q9BQI3 630 aaKnown RBP28.07■■■□□ 2.08
PERM1-203ENST00000479361 DAXXQ9UER7 740 aaPredicted RBP28.07■■■□□ 2.08
PERM1-203ENST00000479361 COL1A2P08123 1366 aa28.07■■■□□ 2.08
PERM1-203ENST00000479361 TREHO43280 583 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 F13A1P00488 732 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms